Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
---|---|
Accession | NC_010465 |
Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170023707
Identifier: 170023707
GI number: 170023707
Start: 1619370
End: 1619852
Strand: Reverse
Name: 170023707
Synonym: YPK_1466
Alternate gene names: NA
Gene position: 1619852-1619370 (Counterclockwise)
Preceding gene: 170023708
Following gene: 170023704
Centisome position: 34.54
GC content: 40.99
Gene sequence:
>483_bases ATGAATGCTATACCTTCAACCTACTCAATTTTTGAGGGCACATTTCTAACACCCGCCCCAGTGTTGGATCGATCGGTGAA TATTTTAATGTTCAGAGATCCCGATAATCACGAATATAATATTATTATCAACCGCACTTTGCTGGAGGAAGAGGATACTT CTGAAACTTTTTGTGAAAAAGAGATGGACGCATTACGCAATAAACTGCCAGGTTTTCAGGTTGAAGGTAAACTCCTCAAG CATGAAATAGGTCCGGCTAAACTGCCCGTAGTACAGGTCGCTAATCACTATTTGCAAGATGGTAAAAAATTCCGTCAAGT CCAATCAATCATGCAGTTACCCTATCACTCGCTGACGAATACCGATGGACGTAGTGTGCTGATTTTCACCCTGAATACCG ACGGTGAGTTTACTGAATATCAACGCAAGCATTACGTACAAATTATCAACAGTTTCAATCCCCATGTTGCCGTTGCAAAT TAA
Upstream 100 bases:
>100_bases CGACCAATCACACGGAAGCGGGTCGAGAACAAAACAGACGCGTCGAAGTACTGATATTACCCACACAAGATAGAACAAGA ATGACGGAGCCTAAACCTTT
Downstream 100 bases:
>100_bases TTTTTGAGCGATATCACGTCATGCTAAATAACCCGACTTAGCATGACGTGGTCGTATTGGAAGAATATGTTAAACATCGC CCTCTTCGCAAATGACTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEKEMDALRNKLPGFQVEGKLLK HEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTNTDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN
Sequences:
>Translated_160_residues MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEKEMDALRNKLPGFQVEGKLLK HEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTNTDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN >Mature_160_residues MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEKEMDALRNKLPGFQVEGKLLK HEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTNTDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN
Specific function: Unknown
COG id: COG5435
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18368; Mature: 18368
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEK CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHH EMDALRNKLPGFQVEGKLLKHEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTN HHHHHHHHCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCC TDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECC >Mature Secondary Structure MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEK CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHH EMDALRNKLPGFQVEGKLLKHEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTN HHHHHHHHCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCC TDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA