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The map label for this gene is dmsC [H]

Identifier: 170023695

GI number: 170023695

Start: 1604739

End: 1605515

Strand: Reverse

Name: dmsC [H]

Synonym: YPK_1454

Alternate gene names: 170023695

Gene position: 1605515-1604739 (Counterclockwise)

Preceding gene: 170023696

Following gene: 170023694

Centisome position: 34.24

GC content: 50.58

Gene sequence:

>777_bases
ATGCATGAATTACCTTTAGTATTTTTTACCGTGCTCGGGCAGACCGCCGTCGGGCTGTTTACACTGGCGTGGCTCAGTAA
CAAGCTAGGGATGACCACGCCGCTGCAACTGAAGCAGGCCAATATTGTTGGGCTGATTCTGGTGATGGCCGGCCTGTTAA
TTGGCACCCTGCATGTTGGGCAACCTCTGCGGGCGATAAATATGTTACTGGGTGTTGGCCGTTCGCCAATGAGTAATGAA
ATTCTGCTCAGTGGCCTGTTTGTTGCCATGGCTTGCGGCACGGTATTCTTTTCGACTCTGGTGAAAAATTCGCTACTGGC
GGCGCTGTGTAATTTTGCCACTGTTCTGGTTGGTCTGACTTTTGCTTGGTCAATAACTCAAGTCTATCAACTGACCACGG
TCCCTAATTGGGATACGTCATATACCTCATTGCAACTTTGGATGACGGTATTGGTTGGCGGTGGGGCTTTCGCTATGTTA
ACCGGGGCGCGTCAACTTGGTGCCATAGCATTGCTAGCCGGTGCCATTGTGACCTTGGTGAATAAACCGGGTTATTTAAC
TTTCCTCGGGCAAGGCTCGGCGGAATTGAGTAGCCAGCAGACCCTCTTCTGGGGAATTCAGATCCTGCTGTTGGTATTAG
GCGTTTTTGTGGCCGCTGCGGCGTTACTGAAAGACAAAATCCCACGGGCAACACTGGCAGTGTGTGCATCAGCGCTTATC
ATCGGTGAATTAGCCGGGCGGATTGCCTTTTATAATCTCTGGCAAATACCAATGTGA

Upstream 100 bases:

>100_bases
GCGCATCTGACACAGCCTAATCTCGTGATTCGTGGCCACCGCGATGCAAAACCATCCGGTGATACATCAGGCCGCATCCA
AAACCCGGCGGAGGTATAAA

Downstream 100 bases:

>100_bases
TTTAATGCGTTGATTTATCATTCCATGTGGTGATTTACCCGCTGATTAGCGGCTATTTTTGCGGCTAATCAGCCCCCGAA
TAACGTTATATCCTAAATAA

Product: putative anaerobic dimethyl sulfoxide reductase subunit C

Products: NA

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQPLRAINMLLGVGRSPMSNE
ILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSYTSLQLWMTVLVGGGAFAML
TGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAALLKDKIPRATLAVCASALI
IGELAGRIAFYNLWQIPM

Sequences:

>Translated_258_residues
MHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQPLRAINMLLGVGRSPMSNE
ILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSYTSLQLWMTVLVGGGAFAML
TGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAALLKDKIPRATLAVCASALI
IGELAGRIAFYNLWQIPM
>Mature_258_residues
MHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQPLRAINMLLGVGRSPMSNE
ILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSYTSLQLWMTVLVGGGAFAML
TGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAALLKDKIPRATLAVCASALI
IGELAGRIAFYNLWQIPM

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=163, Percent_Identity=34.9693251533742, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787123, Length=285, Percent_Identity=29.8245614035088, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 27398; Mature: 27398

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QPLRAINMLLGVGRSPMSNEILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLT
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAWSITQVYQLTTVPNWDTSYTSLQLWMTVLVGGGAFAMLTGARQLGAIALLAGAIVTLV
HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAALLKDKIPRATLAVCASALI
CCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGELAGRIAFYNLWQIPM
HHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
QPLRAINMLLGVGRSPMSNEILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLT
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAWSITQVYQLTTVPNWDTSYTSLQLWMTVLVGGGAFAMLTGARQLGAIALLAGAIVTLV
HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAALLKDKIPRATLAVCASALI
CCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IGELAGRIAFYNLWQIPM
HHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8635740 [H]