Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
---|---|
Accession | NC_010465 |
Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is speG [H]
Identifier: 170023591
GI number: 170023591
Start: 1490093
End: 1490638
Strand: Reverse
Name: speG [H]
Synonym: YPK_1349
Alternate gene names: 170023591
Gene position: 1490638-1490093 (Counterclockwise)
Preceding gene: 170023592
Following gene: 170023586
Centisome position: 31.79
GC content: 39.19
Gene sequence:
>546_bases ATGTCTACCACTAGCAGCGTCAGATTACGCCCACTGGAACGGGAAGATCTGCCGTTTGTTCATCAGTTAGATAATAATGC CAGCATTATGCGCTATTGGTTTGAAGAACCTTATGAAGCCTTTGTTGAGTTGTGTGATCTGTATGATAAACATATCCATG ACCAAAGTGAGCGCCGCTTTATTATTGAAAGTCAGGGAACAAAAATTGGCCTGGTCGAATTAGTTGAAATTAATCATATT CACCGCCGTGCTGAGTTTCAGATCATTATCGACCCAACTCATCAAGGTAAAGGCTACGCCGGAGCAGCGGCTAAATTAGC GATGGAGTATGGCTTTTCGGTACTGAATTTGTACAAACTTTATCTGATTGTGGATAAAGAAAATGAGAAAGCCATTCATA TCTACAGCAAATTAGGCTTTGAAATCGAAGGTGAGTTGAAGCAAGAGTTCTTTATCAATGGTGAATACCGTACTGTTATC CGTATGTGTATTTTCCAACCACAATATTTGGCTAAATATAAAACACCATCGATAAAAAATGCTTAA
Upstream 100 bases:
>100_bases GATCTAATATTCGCGTTTTTGCCTGTATATAATCGCCCAAAACTGACGCTGAGGTTATAATTCTGGCGACAGCGATTGCT GCCGCCATTGAGGAGTCAAC
Downstream 100 bases:
>100_bases TACGTTGGGGTCAGATGGCCCCAATTGTTTCTTCCCCGTTATCTCCGTCATACATCAAGCTACATGTGCGTTGGCTATGC GCAATCAGCCGCATCACTGA
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Diamine acetyltransferase; SAT [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSTTSSVRLRPLEREDLPFVHQLDNNASIMRYWFEEPYEAFVELCDLYDKHIHDQSERRFIIESQGTKIGLVELVEINHI HRRAEFQIIIDPTHQGKGYAGAAAKLAMEYGFSVLNLYKLYLIVDKENEKAIHIYSKLGFEIEGELKQEFFINGEYRTVI RMCIFQPQYLAKYKTPSIKNA
Sequences:
>Translated_181_residues MSTTSSVRLRPLEREDLPFVHQLDNNASIMRYWFEEPYEAFVELCDLYDKHIHDQSERRFIIESQGTKIGLVELVEINHI HRRAEFQIIIDPTHQGKGYAGAAAKLAMEYGFSVLNLYKLYLIVDKENEKAIHIYSKLGFEIEGELKQEFFINGEYRTVI RMCIFQPQYLAKYKTPSIKNA >Mature_180_residues STTSSVRLRPLEREDLPFVHQLDNNASIMRYWFEEPYEAFVELCDLYDKHIHDQSERRFIIESQGTKIGLVELVEINHIH RRAEFQIIIDPTHQGKGYAGAAAKLAMEYGFSVLNLYKLYLIVDKENEKAIHIYSKLGFEIEGELKQEFFINGEYRTVIR MCIFQPQYLAKYKTPSIKNA
Specific function: Regulates polyamine concentration by their degradation. Acts on spermidine, forming N(1)- and N(8)-acetylspermidine [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787867, Length=177, Percent_Identity=79.6610169491525, Blast_Score=301, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.57 [H]
Molecular weight: Translated: 21254; Mature: 21122
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTSSVRLRPLEREDLPFVHQLDNNASIMRYWFEEPYEAFVELCDLYDKHIHDQSERRF CCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE IIESQGTKIGLVELVEINHIHRRAEFQIIIDPTHQGKGYAGAAAKLAMEYGFSVLNLYKL EEECCCCEEEEEEEEEHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHEEEEE YLIVDKENEKAIHIYSKLGFEIEGELKQEFFINGEYRTVIRMCIFQPQYLAKYKTPSIKN EEEEECCCCCEEEEEECCCCEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCCC A C >Mature Secondary Structure STTSSVRLRPLEREDLPFVHQLDNNASIMRYWFEEPYEAFVELCDLYDKHIHDQSERRF CCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE IIESQGTKIGLVELVEINHIHRRAEFQIIIDPTHQGKGYAGAAAKLAMEYGFSVLNLYKL EEECCCCEEEEEEEEEHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHCHHHHEEEEE YLIVDKENEKAIHIYSKLGFEIEGELKQEFFINGEYRTVIRMCIFQPQYLAKYKTPSIKN EEEEECCCCCEEEEEECCCCEEECCCCEEEEECCCHHHHHHHHHCCCHHHHHCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]