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The map label for this gene is smg

Identifier: 170022579

GI number: 170022579

Start: 340373

End: 340846

Strand: Direct

Name: smg

Synonym: YPK_0318

Alternate gene names: 170022579

Gene position: 340373-340846 (Clockwise)

Preceding gene: 170022578

Following gene: 170022580

Centisome position: 7.26

GC content: 44.09

Gene sequence:

>474_bases
ATGTTCGACGTTCTAATTTACTTATTTGAAACTTACATGCACAACGAACCGGAAATGCTTGTCGATCAGGACAAGATTAC
TGACGATCTTGCTGATGCAGGTTTCTACCGTGAGGATATCAACAACGCCCTGAACTGGTTAGAGGTCCTCGCTGATCTAC
AGGAAGGGCAGAAAGCCCCTTATCTCTATACCGCAGATCCACAAGCTTTACGTATCTATACTGTGGAAGAGTGTCGGCGT
CTAGGGGCTGCCTGCCGTGGTTTTATCCTCTTCCTTGAACAAATTCAGGTATTACAGTTTGATACTCGTGAGATGGTGAT
TGATCGTATCATGGCGCTTGATTCCCCCGAGATTGATCTTGAAGATCTTAAATGGGTTGTGCTGATGGTGTTATTCAATA
TACCGGGTTATGAAAATGCCTATAAGCAGATGGAAGAGCTGCTCTTTGAAGTCAATGACGGTTATTTGCACTAG

Upstream 100 bases:

>100_bases
CAACCTGTGCAAGATATTGCCAGCAAATTGCTCGAGCTGGAGTTAGCAGGGTGGATCGCAGCTGTACCCGGCGGCTATGT
CCGAATAAGGAGGGCAGGCC

Downstream 100 bases:

>100_bases
GTGCTAAGATTGCTGGCTAATGGCTTATATAGAAGGCGTTATGACGAAGAAAGTTATTACTAAGGATAATGGATCTTGTC
CTGAGTGCGGGTCAGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFDVLIYLFETYMHNEPEMLVDQDKITDDLADAGFYREDINNALNWLEVLADLQEGQKAPYLYTADPQALRIYTVEECRR
LGAACRGFILFLEQIQVLQFDTREMVIDRIMALDSPEIDLEDLKWVVLMVLFNIPGYENAYKQMEELLFEVNDGYLH

Sequences:

>Translated_157_residues
MFDVLIYLFETYMHNEPEMLVDQDKITDDLADAGFYREDINNALNWLEVLADLQEGQKAPYLYTADPQALRIYTVEECRR
LGAACRGFILFLEQIQVLQFDTREMVIDRIMALDSPEIDLEDLKWVVLMVLFNIPGYENAYKQMEELLFEVNDGYLH
>Mature_157_residues
MFDVLIYLFETYMHNEPEMLVDQDKITDDLADAGFYREDINNALNWLEVLADLQEGQKAPYLYTADPQALRIYTVEECRR
LGAACRGFILFLEQIQVLQFDTREMVIDRIMALDSPEIDLEDLKWVVLMVLFNIPGYENAYKQMEELLFEVNDGYLH

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=70.0636942675159, Blast_Score=226, Evalue=5e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_YERP3 (A7FNK0)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001402828.1
- STRING:   A7FNK0
- GeneID:   5388108
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_3880
- eggNOG:   COG2922
- HOGENOM:   HBG518884
- OMA:   EMRVDQD
- ProtClustDB:   PRK03430
- BioCyc:   YPSE349747:YPSIP31758_3880-MONOMER
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 18472; Mature: 18472

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDVLIYLFETYMHNEPEMLVDQDKITDDLADAGFYREDINNALNWLEVLADLQEGQKAP
CHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
YLYTADPQALRIYTVEECRRLGAACRGFILFLEQIQVLQFDTREMVIDRIMALDSPEIDL
EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCH
EDLKWVVLMVLFNIPGYENAYKQMEELLFEVNDGYLH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFDVLIYLFETYMHNEPEMLVDQDKITDDLADAGFYREDINNALNWLEVLADLQEGQKAP
CHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
YLYTADPQALRIYTVEECRRLGAACRGFILFLEQIQVLQFDTREMVIDRIMALDSPEIDL
EEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCH
EDLKWVVLMVLFNIPGYENAYKQMEELLFEVNDGYLH
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA