Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016352
Identifier: 170016352
GI number: 170016352
Start: 33999
End: 34724
Strand: Direct
Name: 170016352
Synonym: LCK_p100045
Alternate gene names: NA
Gene position: 33999-34724 (Clockwise)
Preceding gene: 170016351
Following gene: 170016353
Centisome position: 87.82
GC content: 32.37
Gene sequence:
>726_bases TTGCTTATCCTGGTGACAATTCAAAGTATAAATTACATTGGTAAAGAAAGGGAACAGAGTATGACAGCAATACAAGTGGG ATCAGATATTAGCATTTTGCCAGATAGTGCCTATCATTTGGTGAAAGAAATATTTATAACCGTTAAAAATGATTATCTAC ATTTATATACGGCTTATCAGAGTTCAAACAAGTTAAGTAGCAAGGCTATGCAATCGATTTATATTGAATTGGCACATTTC TATCAACGTTATGACGATAGAATGACACCTTATTTAGTGCAAGATTTATATGAGCAAATTAAGCAGGTAGAACGTGTAGT AGAATTACTAACAACGTGTGACCAGGCATTAGAAAATTTAGATCAGACAATTAGTTTAATTGAACATCAATATGAAGATG AAGCTGTCATCAATGACGCTATGAAAACTGTTCGTAAACAGTATCAGGCATTGCTAGAAAAAGTTGGCTTAGACGGCAGT GTTATTGATCATGTTAATCAAGCAATAGAGCATATTCATGGTCAATATCGTAAATTACAGGTTCAAAACAAAGCCTTATT TTTTGCACAATTGGAAAATATCCACGATCAAACAATTAAGTATATTAGACACTATATTGAAATTGAGTTTATTCAAAAAC GGATTGATTATGGATTTGATCAGTTTAATACATTTTTGCGATTAGTCGTTGATAATGCAGTCTATCGCAAACAATCAGGT GATTAG
Upstream 100 bases:
>100_bases GGACAAAATGCAGGCACTAGTAAGGATTATGAAATTACGTTAGTGCCTAAGAAATCGTATGCTAAGGATAGTCAAGCCGT TGGTTATGGGGACATGACCT
Downstream 100 bases:
>100_bases TATTGTCATAAGTATGCTCTTATGCTAGATTTACGGACAGATTTTCTTCTGCCCTGTAAACTAATAGCATAGGAGCATTT TTTAATATGATTCGATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLILVTIQSINYIGKEREQSMTAIQVGSDISILPDSAYHLVKEIFITVKNDYLHLYTAYQSSNKLSSKAMQSIYIELAHF YQRYDDRMTPYLVQDLYEQIKQVERVVELLTTCDQALENLDQTISLIEHQYEDEAVINDAMKTVRKQYQALLEKVGLDGS VIDHVNQAIEHIHGQYRKLQVQNKALFFAQLENIHDQTIKYIRHYIEIEFIQKRIDYGFDQFNTFLRLVVDNAVYRKQSG D
Sequences:
>Translated_241_residues MLILVTIQSINYIGKEREQSMTAIQVGSDISILPDSAYHLVKEIFITVKNDYLHLYTAYQSSNKLSSKAMQSIYIELAHF YQRYDDRMTPYLVQDLYEQIKQVERVVELLTTCDQALENLDQTISLIEHQYEDEAVINDAMKTVRKQYQALLEKVGLDGS VIDHVNQAIEHIHGQYRKLQVQNKALFFAQLENIHDQTIKYIRHYIEIEFIQKRIDYGFDQFNTFLRLVVDNAVYRKQSG D >Mature_241_residues MLILVTIQSINYIGKEREQSMTAIQVGSDISILPDSAYHLVKEIFITVKNDYLHLYTAYQSSNKLSSKAMQSIYIELAHF YQRYDDRMTPYLVQDLYEQIKQVERVVELLTTCDQALENLDQTISLIEHQYEDEAVINDAMKTVRKQYQALLEKVGLDGS VIDHVNQAIEHIHGQYRKLQVQNKALFFAQLENIHDQTIKYIRHYIEIEFIQKRIDYGFDQFNTFLRLVVDNAVYRKQSG D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28309; Mature: 28309
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILVTIQSINYIGKEREQSMTAIQVGSDISILPDSAYHLVKEIFITVKNDYLHLYTAYQ CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEHHH SSNKLSSKAMQSIYIELAHFYQRYDDRMTPYLVQDLYEQIKQVERVVELLTTCDQALENL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQTISLIEHQYEDEAVINDAMKTVRKQYQALLEKVGLDGSVIDHVNQAIEHIHGQYRKLQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VQNKALFFAQLENIHDQTIKYIRHYIEIEFIQKRIDYGFDQFNTFLRLVVDNAVYRKQSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC D C >Mature Secondary Structure MLILVTIQSINYIGKEREQSMTAIQVGSDISILPDSAYHLVKEIFITVKNDYLHLYTAYQ CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEHHH SSNKLSSKAMQSIYIELAHFYQRYDDRMTPYLVQDLYEQIKQVERVVELLTTCDQALENL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQTISLIEHQYEDEAVINDAMKTVRKQYQALLEKVGLDGSVIDHVNQAIEHIHGQYRKLQ HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VQNKALFFAQLENIHDQTIKYIRHYIEIEFIQKRIDYGFDQFNTFLRLVVDNAVYRKQSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA