Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016351
Identifier: 170016351
GI number: 170016351
Start: 32813
End: 34042
Strand: Direct
Name: 170016351
Synonym: LCK_p100044
Alternate gene names: NA
Gene position: 32813-34042 (Clockwise)
Preceding gene: 170016350
Following gene: 170016352
Centisome position: 84.76
GC content: 39.67
Gene sequence:
>1230_bases ATGAAAATTGCCTTGTATTGTGCGCCACTACTTGTCATTTTAATATCAGTGCTTTTAATCATTGCGCTAACAATGAACAA TCCTAGTGTTGTCTGTCAGACTGATACAACCACCACGACGACAAGTTCAGATAGTGGTTCCAGTAATGGCTCCTTAACTG ATAAAAATTCAGATATTGGTAAAAGAGTTAGCTATATTATTGATCGTTTTAAAAAAGCTGGTTATTCAGGGGACAATATT TCAGCAATCATTGCGATTGGTTGGCGTGAAAGTAATTTAAACCCTAAAGCGGTTAATCCTGCTGGCTCTGTTAAAGGGAT CTGGCAGTGGGGCGCTGGTGGCATTAACGGTAATCGCTATCAAAATACGGCAGATACAGTTGAAGCCCAGGTCGATTTAG CGTTTAAAGAATTGGCAAGTAGCCATACTGTTGCTAGATTGGGATTAGCAAATGCTAAAGATATTGATAGTTCAGCTTTA GCCTGGGACACAGGTTTTGAGGGTGTTGGGGCAAGTGATCCACAGCGTAAAGTGTCCGAAGTTAAGGCTTGGGCAGAGTC AATTAAAAAAACGTATGATCTTAATTTTGAGGGATCATTAAGCAGTGGCAATAATGCTGTTAGTGATAGCAATACATCAG CAAGTAATAGCGCAGACAGTGATAGCAATAATCAAAGTGCTTATTGTAATACTGATGATAGTGGTTCAGCTGACGGTACA GGCAAGATTAAAGAGAGTGGGCTATCATTTTGGGACAAAAACAGCATTCCAGATGACATTAAACCCTACGTGCATAATAT TACGTCAAAAAAATTAGACTGGAGTTTAACGACACCAGACGCTTACAATCAGTGTGCTGGTTTTTCACAAGTCTATATGA ATGCGATTTGGTCACCTAATTTTACCTTTAGAGGAAATGGTAATGTGACAGCAGAAGCAGTGGCAAAAGTGACTGGTGTT AAGGTTACAACGACACCAAAAGCTGGGGCAGTATTTTCTTCTGATCGTCCTAATCATACAGGCGTGGTGTTACATGTTTT GGCAAATGGTGACTTAATTATTGCTAATCAAAATGCCGTCAAGTCAGGACAAAATGCAGGCACTAGTAAGGATTATGAAA TTACGTTAGTGCCTAAGAAATCGTATGCTAAGGATAGTCAAGCCGTTGGTTATGGGGACATGACCTTTGCTTATCCTGGT GACAATTCAAAGTATAAATTACATTGGTAA
Upstream 100 bases:
>100_bases TAATACTTTTAATCCTTATGAGTAATCATTAAGGATTTTTTTGTTAGTCAAAATTCAGAGAGGAGATCATGTGAAAAATA AAGTTAAACAAGCAGTCGTG
Downstream 100 bases:
>100_bases AGAAAGGGAACAGAGTATGACAGCAATACAAGTGGGATCAGATATTAGCATTTTGCCAGATAGTGCCTATCATTTGGTGA AAGAAATATTTATAACCGTT
Product: putative transfer protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKIALYCAPLLVILISVLLIIALTMNNPSVVCQTDTTTTTTSSDSGSSNGSLTDKNSDIGKRVSYIIDRFKKAGYSGDNI SAIIAIGWRESNLNPKAVNPAGSVKGIWQWGAGGINGNRYQNTADTVEAQVDLAFKELASSHTVARLGLANAKDIDSSAL AWDTGFEGVGASDPQRKVSEVKAWAESIKKTYDLNFEGSLSSGNNAVSDSNTSASNSADSDSNNQSAYCNTDDSGSADGT GKIKESGLSFWDKNSIPDDIKPYVHNITSKKLDWSLTTPDAYNQCAGFSQVYMNAIWSPNFTFRGNGNVTAEAVAKVTGV KVTTTPKAGAVFSSDRPNHTGVVLHVLANGDLIIANQNAVKSGQNAGTSKDYEITLVPKKSYAKDSQAVGYGDMTFAYPG DNSKYKLHW
Sequences:
>Translated_409_residues MKIALYCAPLLVILISVLLIIALTMNNPSVVCQTDTTTTTTSSDSGSSNGSLTDKNSDIGKRVSYIIDRFKKAGYSGDNI SAIIAIGWRESNLNPKAVNPAGSVKGIWQWGAGGINGNRYQNTADTVEAQVDLAFKELASSHTVARLGLANAKDIDSSAL AWDTGFEGVGASDPQRKVSEVKAWAESIKKTYDLNFEGSLSSGNNAVSDSNTSASNSADSDSNNQSAYCNTDDSGSADGT GKIKESGLSFWDKNSIPDDIKPYVHNITSKKLDWSLTTPDAYNQCAGFSQVYMNAIWSPNFTFRGNGNVTAEAVAKVTGV KVTTTPKAGAVFSSDRPNHTGVVLHVLANGDLIIANQNAVKSGQNAGTSKDYEITLVPKKSYAKDSQAVGYGDMTFAYPG DNSKYKLHW >Mature_409_residues MKIALYCAPLLVILISVLLIIALTMNNPSVVCQTDTTTTTTSSDSGSSNGSLTDKNSDIGKRVSYIIDRFKKAGYSGDNI SAIIAIGWRESNLNPKAVNPAGSVKGIWQWGAGGINGNRYQNTADTVEAQVDLAFKELASSHTVARLGLANAKDIDSSAL AWDTGFEGVGASDPQRKVSEVKAWAESIKKTYDLNFEGSLSSGNNAVSDSNTSASNSADSDSNNQSAYCNTDDSGSADGT GKIKESGLSFWDKNSIPDDIKPYVHNITSKKLDWSLTTPDAYNQCAGFSQVYMNAIWSPNFTFRGNGNVTAEAVAKVTGV KVTTTPKAGAVFSSDRPNHTGVVLHVLANGDLIIANQNAVKSGQNAGTSKDYEITLVPKKSYAKDSQAVGYGDMTFAYPG DNSKYKLHW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43495; Mature: 43495
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALYCAPLLVILISVLLIIALTMNNPSVVCQTDTTTTTTSSDSGSSNGSLTDKNSDIG CEEEEHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCHHH KRVSYIIDRFKKAGYSGDNISAIIAIGWRESNLNPKAVNPAGSVKGIWQWGAGGINGNRY HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC QNTADTVEAQVDLAFKELASSHTVARLGLANAKDIDSSALAWDTGFEGVGASDPQRKVSE CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH VKAWAESIKKTYDLNFEGSLSSGNNAVSDSNTSASNSADSDSNNQSAYCNTDDSGSADGT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC GKIKESGLSFWDKNSIPDDIKPYVHNITSKKLDWSLTTPDAYNQCAGFSQVYMNAIWSPN CCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHHHHHHHHCCCC FTFRGNGNVTAEAVAKVTGVKVTTTPKAGAVFSSDRPNHTGVVLHVLANGDLIIANQNAV EEEECCCCCHHHHHHHHHCEEEEECCCCCCEECCCCCCCCCEEEEEEECCCEEEECCHHH KSGQNAGTSKDYEITLVPKKSYAKDSQAVGYGDMTFAYPGDNSKYKLHW CCCCCCCCCCCEEEEEEECHHCCCCCCCCCCCCEEEEECCCCCCEEEEC >Mature Secondary Structure MKIALYCAPLLVILISVLLIIALTMNNPSVVCQTDTTTTTTSSDSGSSNGSLTDKNSDIG CEEEEHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCEEECCCCCCCCCCCCCCCCCHHH KRVSYIIDRFKKAGYSGDNISAIIAIGWRESNLNPKAVNPAGSVKGIWQWGAGGINGNRY HHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCC QNTADTVEAQVDLAFKELASSHTVARLGLANAKDIDSSALAWDTGFEGVGASDPQRKVSE CCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHH VKAWAESIKKTYDLNFEGSLSSGNNAVSDSNTSASNSADSDSNNQSAYCNTDDSGSADGT HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC GKIKESGLSFWDKNSIPDDIKPYVHNITSKKLDWSLTTPDAYNQCAGFSQVYMNAIWSPN CCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHHHHHHHHCCCC FTFRGNGNVTAEAVAKVTGVKVTTTPKAGAVFSSDRPNHTGVVLHVLANGDLIIANQNAV EEEECCCCCHHHHHHHHHCEEEEECCCCCCEECCCCCCCCCEEEEEEECCCEEEECCHHH KSGQNAGTSKDYEITLVPKKSYAKDSQAVGYGDMTFAYPGDNSKYKLHW CCCCCCCCCCCEEEEEEECHHCCCCCCCCCCCCEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA