Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016350
Identifier: 170016350
GI number: 170016350
Start: 32108
End: 32737
Strand: Direct
Name: 170016350
Synonym: LCK_p100043
Alternate gene names: NA
Gene position: 32108-32737 (Clockwise)
Preceding gene: 170016349
Following gene: 170016351
Centisome position: 82.94
GC content: 36.67
Gene sequence:
>630_bases ATGACACGTAAAACAGAAATTGGATATTATGCCCTGTTAGTGGTTTTGGTTCTTGGTAGTTTGCGCTTTGGTCAATTGAT GTGGCAACAACAACAAACCTTATCACATTTGCAAAAACAAGCTAAGCAGTTAAAACATAAACAAGTCATTGCTAAAACTA GCCAGCCAAAAGTGAAGCAGGTGGTTGCTAAAAGTACCATTACGAAAGCTAGTGAGACTAGTCAACAGTTCTTCAATCTT GCTTATAATTGGTCATCTGGATCTGATTATAAAAAACGTATCACGAAAATTAAGCATGCTAAATTAGTCACCAGTCAAGT TTTAGACAATGATTATTTATTTCCAGAGGTTGGTGGCACGGCTGATTACATTGATAATAATGGCTTGAAGTCTAGTGTGG TGCAAGTGGCATATTATCCAAAGGCAACCAATGATGATCAAACTAGCGGTGTCGTTGGTGTGGCTGTGAATGCGAAACAT GATAGTGATGTTGGCAATGGTGAAACACGTTACTACTATTTCAATATTGACTATCAAACCAGTGATAATCAAATTACTAG TCTTGATTATGTTGGGCGGTTAGCCGTTAATCAAAGCACTGATTTTAATACTTTTAATCCTTATGAGTAA
Upstream 100 bases:
>100_bases GTAGTCGCACAGTTAATTATCAATTATTGGGACAATTGAATGCAAAAGGTAATGAGGTCATCTCATTGACTTTAGGTAAT CTCACAAAGGGGGCTCAATA
Downstream 100 bases:
>100_bases TCATTAAGGATTTTTTTGTTAGTCAAAATTCAGAGAGGAGATCATGTGAAAAATAAAGTTAAACAAGCAGTCGTGATGAA AATTGCCTTGTATTGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTRKTEIGYYALLVVLVLGSLRFGQLMWQQQQTLSHLQKQAKQLKHKQVIAKTSQPKVKQVVAKSTITKASETSQQFFNL AYNWSSGSDYKKRITKIKHAKLVTSQVLDNDYLFPEVGGTADYIDNNGLKSSVVQVAYYPKATNDDQTSGVVGVAVNAKH DSDVGNGETRYYYFNIDYQTSDNQITSLDYVGRLAVNQSTDFNTFNPYE
Sequences:
>Translated_209_residues MTRKTEIGYYALLVVLVLGSLRFGQLMWQQQQTLSHLQKQAKQLKHKQVIAKTSQPKVKQVVAKSTITKASETSQQFFNL AYNWSSGSDYKKRITKIKHAKLVTSQVLDNDYLFPEVGGTADYIDNNGLKSSVVQVAYYPKATNDDQTSGVVGVAVNAKH DSDVGNGETRYYYFNIDYQTSDNQITSLDYVGRLAVNQSTDFNTFNPYE >Mature_208_residues TRKTEIGYYALLVVLVLGSLRFGQLMWQQQQTLSHLQKQAKQLKHKQVIAKTSQPKVKQVVAKSTITKASETSQQFFNLA YNWSSGSDYKKRITKIKHAKLVTSQVLDNDYLFPEVGGTADYIDNNGLKSSVVQVAYYPKATNDDQTSGVVGVAVNAKHD SDVGNGETRYYYFNIDYQTSDNQITSLDYVGRLAVNQSTDFNTFNPYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23559; Mature: 23427
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKTEIGYYALLVVLVLGSLRFGQLMWQQQQTLSHLQKQAKQLKHKQVIAKTSQPKVKQ CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VVAKSTITKASETSQQFFNLAYNWSSGSDYKKRITKIKHAKLVTSQVLDNDYLFPEVGGT HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ADYIDNNGLKSSVVQVAYYPKATNDDQTSGVVGVAVNAKHDSDVGNGETRYYYFNIDYQT HHHCCCCCCHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEC SDNQITSLDYVGRLAVNQSTDFNTFNPYE CCCCEEHHHHHHHEEECCCCCCCCCCCCC >Mature Secondary Structure TRKTEIGYYALLVVLVLGSLRFGQLMWQQQQTLSHLQKQAKQLKHKQVIAKTSQPKVKQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VVAKSTITKASETSQQFFNLAYNWSSGSDYKKRITKIKHAKLVTSQVLDNDYLFPEVGGT HHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ADYIDNNGLKSSVVQVAYYPKATNDDQTSGVVGVAVNAKHDSDVGNGETRYYYFNIDYQT HHHCCCCCCHHHEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEC SDNQITSLDYVGRLAVNQSTDFNTFNPYE CCCCEEHHHHHHHEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA