Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016349
Identifier: 170016349
GI number: 170016349
Start: 31578
End: 32108
Strand: Direct
Name: 170016349
Synonym: LCK_p100042
Alternate gene names: NA
Gene position: 31578-32108 (Clockwise)
Preceding gene: 170016348
Following gene: 170016350
Centisome position: 81.57
GC content: 36.91
Gene sequence:
>531_bases ATGACAAACACTAAAATAAAGGTGTTAAGTGCTATTGGGTTTTTCCTGATTGGCGCTTTTTTTTATACACAATTTCAGAA ATCACAAATCAAACAAGCGACTGCCACCGTTGCTAAACTGTCAGCGGCACAAACCTTGATCAACAATAGTGGCACGATCA CAAAAGTGATTGCTAATGATAACCAATTGCCAGACAATAGCCAACAAAAAGCCACTGTGAATGATTTGTTTAATGCGGGT TATGTATCAGATAAACAAGTGTTATCAAAGGTGGCAGATGATAAAGTCAGAAAGTTAGTTAAACAATTTCTAGGGCAATT AGAGGGTGATTCAGTACAGGCAAAGAAATGGCATGTATCGGATAATCAATTGCAATTTAGCCAACAAAAAGACGGCATAT TATTTTTTGGTGCCTTAACGGCAACTAATGGTAGTCGCACAGTTAATTATCAATTATTGGGACAATTGAATGCAAAAGGT AATGAGGTCATCTCATTGACTTTAGGTAATCTCACAAAGGGGGCTCAATAA
Upstream 100 bases:
>100_bases TTGTTAAAGAAACAGGGGCTAAATACCCTTTTGCATTTGAATTCAACGCTGGGTATATGATTACGCAAGAATGGTATGGA AGGGATATTAAAATTTAAAA
Downstream 100 bases:
>100_bases TGACACGTAAAACAGAAATTGGATATTATGCCCTGTTAGTGGTTTTGGTTCTTGGTAGTTTGCGCTTTGGTCAATTGATG TGGCAACAACAACAAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTNTKIKVLSAIGFFLIGAFFYTQFQKSQIKQATATVAKLSAAQTLINNSGTITKVIANDNQLPDNSQQKATVNDLFNAG YVSDKQVLSKVADDKVRKLVKQFLGQLEGDSVQAKKWHVSDNQLQFSQQKDGILFFGALTATNGSRTVNYQLLGQLNAKG NEVISLTLGNLTKGAQ
Sequences:
>Translated_176_residues MTNTKIKVLSAIGFFLIGAFFYTQFQKSQIKQATATVAKLSAAQTLINNSGTITKVIANDNQLPDNSQQKATVNDLFNAG YVSDKQVLSKVADDKVRKLVKQFLGQLEGDSVQAKKWHVSDNQLQFSQQKDGILFFGALTATNGSRTVNYQLLGQLNAKG NEVISLTLGNLTKGAQ >Mature_175_residues TNTKIKVLSAIGFFLIGAFFYTQFQKSQIKQATATVAKLSAAQTLINNSGTITKVIANDNQLPDNSQQKATVNDLFNAGY VSDKQVLSKVADDKVRKLVKQFLGQLEGDSVQAKKWHVSDNQLQFSQQKDGILFFGALTATNGSRTVNYQLLGQLNAKGN EVISLTLGNLTKGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19145; Mature: 19014
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTKIKVLSAIGFFLIGAFFYTQFQKSQIKQATATVAKLSAAQTLINNSGTITKVIAND CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC NQLPDNSQQKATVNDLFNAGYVSDKQVLSKVADDKVRKLVKQFLGQLEGDSVQAKKWHVS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECC DNQLQFSQQKDGILFFGALTATNGSRTVNYQLLGQLNAKGNEVISLTLGNLTKGAQ CCCEEECCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCC >Mature Secondary Structure TNTKIKVLSAIGFFLIGAFFYTQFQKSQIKQATATVAKLSAAQTLINNSGTITKVIAND CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC NQLPDNSQQKATVNDLFNAGYVSDKQVLSKVADDKVRKLVKQFLGQLEGDSVQAKKWHVS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEECC DNQLQFSQQKDGILFFGALTATNGSRTVNYQLLGQLNAKGNEVISLTLGNLTKGAQ CCCEEECCCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA