Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016348
Identifier: 170016348
GI number: 170016348
Start: 31012
End: 31575
Strand: Direct
Name: 170016348
Synonym: LCK_p100041
Alternate gene names: NA
Gene position: 31012-31575 (Clockwise)
Preceding gene: 170016346
Following gene: 170016349
Centisome position: 80.11
GC content: 35.28
Gene sequence:
>564_bases ATGAACAAATGGCGAAAATTGCGAGAGAATAAATCAATTGATTGGAGAGTTATGAATAAAAAATCAGCGTTGACATTGGG ATCTATTGGGGGCGTGTTAGTCATTTTGCTTATCATCATTGCCTTTGTAATGACGGGACAACATAAAACTAGCTCACAAT CTGCTAGTTCGAAATTGCCAAAAATCAATCAAGCTAAAGTGATGAAACGTATTGATTATGAAATATTTTCAATGAATAAT GATGGTCGTTACGTTGAAAATGTTGATAACGAACCTACTTATGTAGACGGTGAAAAAGTTGGTGAACGGTCAATAACAAG TATGGTATATGTTAGTGCAACGGGGAAAGAGGCACCTAGTGACGGGGCTGGAAATTATAATACTTTCTTCAAAAATCATG AAATAGAAAACTTGGTAACAATTTGGCATAAAGACGGCAATTCATTTGTTGCGAAAGGCTACTTTGTTGTTAAAGAAACA GGGGCTAAATACCCTTTTGCATTTGAATTCAACGCTGGGTATATGATTACGCAAGAATGGTATGGAAGGGATATTAAAAT TTAA
Upstream 100 bases:
>100_bases GTGACACGACAATATTTTGAACAGTATCATGTTCAAGTGGCGCCAACTGTCTTAGTAGTCCAAAAAGGGGCAGTCATCAA ACGTATTGTGAAGCCAACAC
Downstream 100 bases:
>100_bases AAATGACAAACACTAAAATAAAGGTGTTAAGTGCTATTGGGTTTTTCCTGATTGGCGCTTTTTTTTATACACAATTTCAG AAATCACAAATCAAACAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNKWRKLRENKSIDWRVMNKKSALTLGSIGGVLVILLIIIAFVMTGQHKTSSQSASSKLPKINQAKVMKRIDYEIFSMNN DGRYVENVDNEPTYVDGEKVGERSITSMVYVSATGKEAPSDGAGNYNTFFKNHEIENLVTIWHKDGNSFVAKGYFVVKET GAKYPFAFEFNAGYMITQEWYGRDIKI
Sequences:
>Translated_187_residues MNKWRKLRENKSIDWRVMNKKSALTLGSIGGVLVILLIIIAFVMTGQHKTSSQSASSKLPKINQAKVMKRIDYEIFSMNN DGRYVENVDNEPTYVDGEKVGERSITSMVYVSATGKEAPSDGAGNYNTFFKNHEIENLVTIWHKDGNSFVAKGYFVVKET GAKYPFAFEFNAGYMITQEWYGRDIKI >Mature_187_residues MNKWRKLRENKSIDWRVMNKKSALTLGSIGGVLVILLIIIAFVMTGQHKTSSQSASSKLPKINQAKVMKRIDYEIFSMNN DGRYVENVDNEPTYVDGEKVGERSITSMVYVSATGKEAPSDGAGNYNTFFKNHEIENLVTIWHKDGNSFVAKGYFVVKET GAKYPFAFEFNAGYMITQEWYGRDIKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21212; Mature: 21212
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWRKLRENKSIDWRVMNKKSALTLGSIGGVLVILLIIIAFVMTGQHKTSSQSASSKLP CCHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC KINQAKVMKRIDYEIFSMNNDGRYVENVDNEPTYVDGEKVGERSITSMVYVSATGKEAPS CCCHHHHHHHHCEEEEEECCCCCEEECCCCCCCEECHHHHCCCCEEEEEEEEECCCCCCC DGAGNYNTFFKNHEIENLVTIWHKDGNSFVAKGYFVVKETGAKYPFAFEFNAGYMITQEW CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCEEEEECCCEEEEHHH YGRDIKI CCCCCCC >Mature Secondary Structure MNKWRKLRENKSIDWRVMNKKSALTLGSIGGVLVILLIIIAFVMTGQHKTSSQSASSKLP CCHHHHHHCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC KINQAKVMKRIDYEIFSMNNDGRYVENVDNEPTYVDGEKVGERSITSMVYVSATGKEAPS CCCHHHHHHHHCEEEEEECCCCCEEECCCCCCCEECHHHHCCCCEEEEEEEEECCCCCCC DGAGNYNTFFKNHEIENLVTIWHKDGNSFVAKGYFVVKETGAKYPFAFEFNAGYMITQEW CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCEEEEECCCEEEEHHH YGRDIKI CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA