Definition | Leuconostoc citreum KM20 plasmid pLCK1, complete sequence. |
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Accession | NC_010470 |
Length | 38,713 |
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The map label for this gene is 170016336
Identifier: 170016336
GI number: 170016336
Start: 21665
End: 21979
Strand: Direct
Name: 170016336
Synonym: LCK_p100029
Alternate gene names: NA
Gene position: 21665-21979 (Clockwise)
Preceding gene: 170016335
Following gene: 170016337
Centisome position: 55.96
GC content: 40.32
Gene sequence:
>315_bases TTGGAGGACACACAGATGTCAGAACAAGGAACACAATTCAAAAAAGCACTTAGCGCTACTGCAACCGAAGTCGCTAACTT TAAGGCATTATCAAAAATTGAAGACGGTAATTTGTATGCTGCCGTGAACAAGGCTAAGGAAATCATGGAAAATGATCCAA AGTGGAGTGATTTAATTGGTGATGATCTTGCTAGCTTACGCCGTAACTTGGCTGTATTGAACAAACAATACAAGTCATTG CCAAAGGTGGCGGATAACGTCATCAATTTAGCCGAAGAAATTACGCAAAAAGTAGATCGGTTTGGGGGTATGTAA
Upstream 100 bases:
>100_bases AAAATTGATGAAATTCTTGATGATACGGAATTGAGTCAACGTCAAAAGAAATTGTTATCAGTTGCTGAAAAGGTTAACTT ACCTTTTTAAAAGTTAAAAA
Downstream 100 bases:
>100_bases AATTTGTGTTTGATAAGTTAAAGTCAATCAAAAAGGGTTATGTCCAGTCTCGTGATAAGCCAGACCAATCATTACCTTAT GCCAAAGTCCAAAAACGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MEDTQMSEQGTQFKKALSATATEVANFKALSKIEDGNLYAAVNKAKEIMENDPKWSDLIGDDLASLRRNLAVLNKQYKSL PKVADNVINLAEEITQKVDRFGGM
Sequences:
>Translated_104_residues MEDTQMSEQGTQFKKALSATATEVANFKALSKIEDGNLYAAVNKAKEIMENDPKWSDLIGDDLASLRRNLAVLNKQYKSL PKVADNVINLAEEITQKVDRFGGM >Mature_104_residues MEDTQMSEQGTQFKKALSATATEVANFKALSKIEDGNLYAAVNKAKEIMENDPKWSDLIGDDLASLRRNLAVLNKQYKSL PKVADNVINLAEEITQKVDRFGGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11535; Mature: 11535
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDTQMSEQGTQFKKALSATATEVANFKALSKIEDGNLYAAVNKAKEIMENDPKWSDLIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH DDLASLRRNLAVLNKQYKSLPKVADNVINLAEEITQKVDRFGGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEDTQMSEQGTQFKKALSATATEVANFKALSKIEDGNLYAAVNKAKEIMENDPKWSDLIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH DDLASLRRNLAVLNKQYKSLPKVADNVINLAEEITQKVDRFGGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA