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The map label for this gene is yddB [H]

Identifier: 170016337

GI number: 170016337

Start: 21985

End: 22956

Strand: Direct

Name: yddB [H]

Synonym: LCK_p100030

Alternate gene names: 170016337

Gene position: 21985-22956 (Clockwise)

Preceding gene: 170016336

Following gene: 170016338

Centisome position: 56.79

GC content: 37.14

Gene sequence:

>972_bases
GTGTTTGATAAGTTAAAGTCAATCAAAAAGGGTTATGTCCAGTCTCGTGATAAGCCAGACCAATCATTACCTTATGCCAA
AGTCCAAAAACGGGGCAAATGGATTAGGCGTTTTGTTAAAATTGCTCTGGTGTTAGTTGGTTTGAGTGGTGCAATTGCTT
TTATTAAAGCTAGTAATGTGAGCCAGACTAATCATAAGCTCATTGCTAAGATGAAAACGTATGATGACAAGCTAGAAAAG
GCTAGTATGGGACAAAGTGTTTATTCACCTAGTCTTAATCGTTATGCGCAAGGTTTTTTTCAAACCTATTTCACGCAGTC
AGATAATGCTGATGATAAGCAAAAACGTTTGAAAGTCTTAAAAAAGTATTTTGCTACTAATATCAGTAGCACAATTTATG
ATAATCAGGACTCGAAAAAAGAGACGTATGTGGGATCCAGATTATTAAATACGTTTACCAAAAATGACGTGAAGATTGCA
CAGTATCAAGTTGGCTATACGGTTGTCAATGATAAAAATACAATTATTCGCGTTTTTAATTTGCCTTTTGCTCAAAAAGC
AGGGCAGTACACTGTTTTGGCGTTACCTTATGCCACAACCGAACAAGATATTGTCGGACATGTTGGCAAGATTGATCAAG
ATGATACCAATAATGCCACGTTGGCAAGCAGTGATAAAGTTCAAGCCTTTGTCAAAGCCTTTAGTGAGAAGTATGTGAGT
TCAAAAGCTAGTGATATGTCCTTAATCATGAAAGAGCCAGAGGGACTAGAGGGACAATACGCCGTTAAGAGTATTGACCA
AATCAATGTTTCAGGTTCTAAGAATAGCATGAACATTAAGTATCTTTTGACACTAACAGACACCGAGACAAAGCTTGAAC
ATTCAGAACAGATTACCTTGACCGTTTCGCCAAAGGGATCAACTTATTATGTGGTTAAGATGATCCATACACAAGGCGGT
CTATTAAATTAA

Upstream 100 bases:

>100_bases
ACAAACAATACAAGTCATTGCCAAAGGTGGCGGATAACGTCATCAATTTAGCCGAAGAAATTACGCAAAAAGTAGATCGG
TTTGGGGGTATGTAAAATTT

Downstream 100 bases:

>100_bases
GAGGAGGTTATGATGGAAGCAATCGTAACAAATTTTATGTTTCAAATTCCCACGGGATCCATTAGCTTTACGGGTCTTCA
ATCAGAAGTAGCTGGTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MFDKLKSIKKGYVQSRDKPDQSLPYAKVQKRGKWIRRFVKIALVLVGLSGAIAFIKASNVSQTNHKLIAKMKTYDDKLEK
ASMGQSVYSPSLNRYAQGFFQTYFTQSDNADDKQKRLKVLKKYFATNISSTIYDNQDSKKETYVGSRLLNTFTKNDVKIA
QYQVGYTVVNDKNTIIRVFNLPFAQKAGQYTVLALPYATTEQDIVGHVGKIDQDDTNNATLASSDKVQAFVKAFSEKYVS
SKASDMSLIMKEPEGLEGQYAVKSIDQINVSGSKNSMNIKYLLTLTDTETKLEHSEQITLTVSPKGSTYYVVKMIHTQGG
LLN

Sequences:

>Translated_323_residues
MFDKLKSIKKGYVQSRDKPDQSLPYAKVQKRGKWIRRFVKIALVLVGLSGAIAFIKASNVSQTNHKLIAKMKTYDDKLEK
ASMGQSVYSPSLNRYAQGFFQTYFTQSDNADDKQKRLKVLKKYFATNISSTIYDNQDSKKETYVGSRLLNTFTKNDVKIA
QYQVGYTVVNDKNTIIRVFNLPFAQKAGQYTVLALPYATTEQDIVGHVGKIDQDDTNNATLASSDKVQAFVKAFSEKYVS
SKASDMSLIMKEPEGLEGQYAVKSIDQINVSGSKNSMNIKYLLTLTDTETKLEHSEQITLTVSPKGSTYYVVKMIHTQGG
LLN
>Mature_323_residues
MFDKLKSIKKGYVQSRDKPDQSLPYAKVQKRGKWIRRFVKIALVLVGLSGAIAFIKASNVSQTNHKLIAKMKTYDDKLEK
ASMGQSVYSPSLNRYAQGFFQTYFTQSDNADDKQKRLKVLKKYFATNISSTIYDNQDSKKETYVGSRLLNTFTKNDVKIA
QYQVGYTVVNDKNTIIRVFNLPFAQKAGQYTVLALPYATTEQDIVGHVGKIDQDDTNNATLASSDKVQAFVKAFSEKYVS
SKASDMSLIMKEPEGLEGQYAVKSIDQINVSGSKNSMNIKYLLTLTDTETKLEHSEQITLTVSPKGSTYYVVKMIHTQGG
LLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36270; Mature: 36270

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKLKSIKKGYVQSRDKPDQSLPYAKVQKRGKWIRRFVKIALVLVGLSGAIAFIKASNV
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SQTNHKLIAKMKTYDDKLEKASMGQSVYSPSLNRYAQGFFQTYFTQSDNADDKQKRLKVL
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KKYFATNISSTIYDNQDSKKETYVGSRLLNTFTKNDVKIAQYQVGYTVVNDKNTIIRVFN
HHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEE
LPFAQKAGQYTVLALPYATTEQDIVGHVGKIDQDDTNNATLASSDKVQAFVKAFSEKYVS
CCHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
SKASDMSLIMKEPEGLEGQYAVKSIDQINVSGSKNSMNIKYLLTLTDTETKLEHSEQITL
CCCCCCEEEEECCCCCCCCHHHHHHHEEECCCCCCCEEEEEEEEEECCHHHHCCCCEEEE
TVSPKGSTYYVVKMIHTQGGLLN
EECCCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure
MFDKLKSIKKGYVQSRDKPDQSLPYAKVQKRGKWIRRFVKIALVLVGLSGAIAFIKASNV
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
SQTNHKLIAKMKTYDDKLEKASMGQSVYSPSLNRYAQGFFQTYFTQSDNADDKQKRLKVL
CCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
KKYFATNISSTIYDNQDSKKETYVGSRLLNTFTKNDVKIAQYQVGYTVVNDKNTIIRVFN
HHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEEEEE
LPFAQKAGQYTVLALPYATTEQDIVGHVGKIDQDDTNNATLASSDKVQAFVKAFSEKYVS
CCHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
SKASDMSLIMKEPEGLEGQYAVKSIDQINVSGSKNSMNIKYLLTLTDTETKLEHSEQITL
CCCCCCEEEEECCCCCCCCHHHHHHHEEECCCCCCCEEEEEEEEEECCHHHHCCCCEEEE
TVSPKGSTYYVVKMIHTQGGLLN
EECCCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]