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The map label for this gene is sufB [H]

Identifier: 169824167

GI number: 169824167

Start: 527894

End: 529306

Strand: Direct

Name: sufB [H]

Synonym: FMG_0470

Alternate gene names: 169824167

Gene position: 527894-529306 (Clockwise)

Preceding gene: 169824166

Following gene: 169824168

Centisome position: 29.37

GC content: 36.02

Gene sequence:

>1413_bases
ATGGCACCTACAAAGAAGACTCAAGTTGATGAAATGGATAGAGGTATCTATGACATCAAGAATAAATTTACTTTTAGAAA
GAAAACCGAAGAGGGTTTGACTCCTGAAATCGTAAGACAAATTTCAAAAGAAAAGAAAGAACCTCAATGGATGCTTGAAA
AAAGATTAGAAGCTCTTGAAATTTTCTTTAATTCAGAAGATCCTGAATGGGGTCCTGATTTGAGTGTCGTTGATATGGAT
AAGGTCACAACATATATTAGACCTGATGCAGACATGTCTAGCGACTGGAATGAAGTTCCGGATGAAATCAGAGATACTTT
TGATAAGTTAGGTATTCAAGAAGCTGAAAAAGAAATGATGTTAAGTGGGGTTGGTGCGCAATACGATAGTGAGGTTGTGT
ATCACAACATTCAACAATCTTTGGTTGACCAAGGAGTTATATATACAGATTTTGATACAGCTCTTAAAGAACATGAAGAT
ATTGTTAAAAAATACTTTGCAAAATCAATCACACCGCGACTTCACAAATACGCTGCACTTCATTATGCGGTATGGTCAGG
TGGATCATTTGTTTATGTTCCAAAAGGAGTAGATGTTAAGATTCCACTTCAAAGTTATTTTAGATTGAATGCTCCAGGAG
CAGGTCAATTTGAACATACAATGATTATCGTAGAAGATGACAGTTATTGTCACTTCATCGAAGGTTGCTCAGCTCCAAAA
TACAACGCATTAAATGTACATGCGGGTGCAGTTGAAATATTTGTTGGAGAAAACTCTACTCTTAGATTTTCTACAATTGA
AAACTGGTCACGTAATATGTACAATTTGAACTCAAAAAGAGCAATCATTGAAAAAAATGGTAAGGTTGAATGGGTTTCTG
GTTCGTTCGGATCAGCAGTATCTATGCTTTATCCTTCAAGTGTCTTGAAGGGAGAAGGCGCAAGTAGTGAGTACACTGGT
ATTTCATTTGCAGGACGCGATCAAAACTTAGACACAGGCGCTGTTATGATTCACGCAGCTCCACATACTACAAGCTATGT
AAACAGTAAGTCAATTTCTAAATCAGGAGGTATTAGTGTTTACAGAGGTTTGGTAGACATAAAAGAAAATGCTTACGATT
CAAAATCATCAGTAAGCTGTGAATCGTTAATGTTAGATAACGAAAGTAGATCAGATACAATTCCGGTTGTTAAAATAGCG
AATAAACATGTCGATTTAGGACATGAAGCATCTATCGGTAGGATAGATGATCAAGTTATTTTCTATTTGATGACAAGAGG
TATTCCAGAAGAAGAAGCAAAATCAATGGTAGTTCGTGGATTTGCTGAACCAATAGCGAAGGAATTACCTATGGAATATG
CGGTTGAGATGAATAATTTGATTAATCTTGAATTAGAAGGAAGCATAGGATAG

Upstream 100 bases:

>100_bases
ATGTAATCATGGATGGTAGTATTGTAAAAGAAGGTTCTAGCGAACTTTTGGATCAAATTGAAGAAAAAGGATTCAATTGG
ATTAGAGAAGAGGTGAAATA

Downstream 100 bases:

>100_bases
GAGTTGTATATGGAACAAATTAAAGGAAATAGACTGGGATTTAAAACTTTCAAATATTTGAAAGTCAACGATACAGAAAT
AAATCTTCCAGATATAGATA

Product: putative iron-regulated ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MAPTKKTQVDEMDRGIYDIKNKFTFRKKTEEGLTPEIVRQISKEKKEPQWMLEKRLEALEIFFNSEDPEWGPDLSVVDMD
KVTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHED
IVKKYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPK
YNALNVHAGAVEIFVGENSTLRFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTG
ISFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVVKIA
NKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEMNNLINLELEGSIG

Sequences:

>Translated_470_residues
MAPTKKTQVDEMDRGIYDIKNKFTFRKKTEEGLTPEIVRQISKEKKEPQWMLEKRLEALEIFFNSEDPEWGPDLSVVDMD
KVTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHED
IVKKYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPK
YNALNVHAGAVEIFVGENSTLRFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTG
ISFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVVKIA
NKHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEMNNLINLELEGSIG
>Mature_469_residues
APTKKTQVDEMDRGIYDIKNKFTFRKKTEEGLTPEIVRQISKEKKEPQWMLEKRLEALEIFFNSEDPEWGPDLSVVDMDK
VTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMMLSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHEDI
VKKYFAKSITPRLHKYAALHYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPKY
NALNVHAGAVEIFVGENSTLRFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAVSMLYPSSVLKGEGASSEYTGI
SFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISVYRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVVKIAN
KHVDLGHEASIGRIDDQVIFYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEMNNLINLELEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=484, Percent_Identity=34.504132231405, Blast_Score=304, Evalue=9e-84,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=27.9220779220779, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52669; Mature: 52538

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTKKTQVDEMDRGIYDIKNKFTFRKKTEEGLTPEIVRQISKEKKEPQWMLEKRLEALE
CCCCCCCCHHHHHCCHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHE
IFFNSEDPEWGPDLSVVDMDKVTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMM
EEECCCCCCCCCCCCEEEHHHHHEEECCCCCCCCCHHHCHHHHHHHHHHCCHHHHHHHHH
LSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHEDIVKKYFAKSITPRLHKYAAL
HHCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPK
EEEEECCCEEEEECCCCEEEECHHHHEEECCCCCCCCEEEEEEEECCCCEEEECCCCCCC
YNALNVHAGAVEIFVGENSTLRFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAV
CCEEEEECCEEEEEECCCCEEEEEEHHHHCCHHCCCCCCEEEEECCCEEEEECCCCCCHH
SMLYPSSVLKGEGASSEYTGISFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISV
HHHCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHH
YRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVVKIANKHVDLGHEASIGRIDDQVI
HHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
FYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEMNNLINLELEGSIG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure 
APTKKTQVDEMDRGIYDIKNKFTFRKKTEEGLTPEIVRQISKEKKEPQWMLEKRLEALE
CCCCCCCHHHHHCCHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHE
IFFNSEDPEWGPDLSVVDMDKVTTYIRPDADMSSDWNEVPDEIRDTFDKLGIQEAEKEMM
EEECCCCCCCCCCCCEEEHHHHHEEECCCCCCCCCHHHCHHHHHHHHHHCCHHHHHHHHH
LSGVGAQYDSEVVYHNIQQSLVDQGVIYTDFDTALKEHEDIVKKYFAKSITPRLHKYAAL
HHCCCCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
HYAVWSGGSFVYVPKGVDVKIPLQSYFRLNAPGAGQFEHTMIIVEDDSYCHFIEGCSAPK
EEEEECCCEEEEECCCCEEEECHHHHEEECCCCCCCCEEEEEEEECCCCEEEECCCCCCC
YNALNVHAGAVEIFVGENSTLRFSTIENWSRNMYNLNSKRAIIEKNGKVEWVSGSFGSAV
CCEEEEECCEEEEEECCCCEEEEEEHHHHCCHHCCCCCCEEEEECCCEEEEECCCCCCHH
SMLYPSSVLKGEGASSEYTGISFAGRDQNLDTGAVMIHAAPHTTSYVNSKSISKSGGISV
HHHCCHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCHHCCCCCCCCCCCHHH
YRGLVDIKENAYDSKSSVSCESLMLDNESRSDTIPVVKIANKHVDLGHEASIGRIDDQVI
HHHHHHHHHCCCCCCCCCCHHHHEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
FYLMTRGIPEEEAKSMVVRGFAEPIAKELPMEYAVEMNNLINLELEGSIG
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]