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The map label for this gene is sufD [H]

Identifier: 169824168

GI number: 169824168

Start: 529316

End: 530365

Strand: Direct

Name: sufD [H]

Synonym: FMG_0471

Alternate gene names: 169824168

Gene position: 529316-530365 (Clockwise)

Preceding gene: 169824167

Following gene: 169824169

Centisome position: 29.45

GC content: 31.24

Gene sequence:

>1050_bases
ATGGAACAAATTAAAGGAAATAGACTGGGATTTAAAACTTTCAAATATTTGAAAGTCAACGATACAGAAATAAATCTTCC
AGATATAGATATAAAAGAATACAGAATAGACTCTGATCCAGTAGAAGCATTGGATAACAAAGATTTTGGTGTGTGCCAAG
AAGCTTTGGATATGAACGAAAAATCGGGAAATCTATTCAAAAAATATAAAACAGAAGAAAATCAAGTAAAAGATTTCGGA
GTTATTGAGTTGGTAACTGATAGAGAATATGATATTTTGTTGGATACTCACAAAATTGTTGCCGAAAAGAACTCAAGTTT
ACGAATTGTTCTTGATTACAGAGATAATGACGACAACAAGAAATTCAGAAGTTCAGTAATTGAAATCAATGCAAAAGAAA
ACAGTAATGTTGAATTATTTGTAATTCAAACAGAAAAAAACACAACAGCATTGGAATCAGTTATCTTGAATTTAGATGAA
GAAAGTAATGTAATCCTTAGCCAATACGAATTGGGAAGTAAGGACAATTATGTCAATACAAAAGCTAATTTGAATGGGAA
GCATTCTTACTTGGATATCAACAGCATTTATTTCACACATGGAGAAAACTCATTGAATATGCTTTATGAAATAAATCATT
TCGGAAAAGAATCCAAATCTTCATGTATTGTAAATGGTGCATTAAAAGAATCATCTTACAAAAACTTCAAGTCAACTCTT
GATTTCAAAAAAGGTTCCATGGGTTCTACAGGAACAGAAGAAGAATACGCAGTTTTATTATCAGATGATGCAAAAAGCTT
GTCAGTTCCTATACTTTTAGCAGGAGAAGACGACGTAATAGGAAATCACGCAGCAAGTGCAGGTAAGATTGATCAAGACA
TGCTATTTTATATAATGAACCGTGCTATATCTAGAGATGTAGCAGAAAGTATGATAGTTGAATCCAAATTCAGCGAATCT
CTAAGTAGATTAGATGACAAAAATTTGGAAGAAAAACTACTTTCATTCATCAGAGAAAAAATGTCAAAGAGGGAATTGGA
TGTTAGATAA

Upstream 100 bases:

>100_bases
TGCTGAACCAATAGCGAAGGAATTACCTATGGAATATGCGGTTGAGATGAATAATTTGATTAATCTTGAATTAGAAGGAA
GCATAGGATAGGAGTTGTAT

Downstream 100 bases:

>100_bases
AAAGCAAGTAGAAGATATAAGAAAGGACTTTTTGTATTTGAGTAAAGAATACAAAAATCCGATAGTTTATTTGGACAATG
CAGCTACCAGCCAAAAACCG

Product: putative iron-regulated ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEQIKGNRLGFKTFKYLKVNDTEINLPDIDIKEYRIDSDPVEALDNKDFGVCQEALDMNEKSGNLFKKYKTEENQVKDFG
VIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNKKFRSSVIEINAKENSNVELFVIQTEKNTTALESVILNLDE
ESNVILSQYELGSKDNYVNTKANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTL
DFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIVESKFSES
LSRLDDKNLEEKLLSFIREKMSKRELDVR

Sequences:

>Translated_349_residues
MEQIKGNRLGFKTFKYLKVNDTEINLPDIDIKEYRIDSDPVEALDNKDFGVCQEALDMNEKSGNLFKKYKTEENQVKDFG
VIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNKKFRSSVIEINAKENSNVELFVIQTEKNTTALESVILNLDE
ESNVILSQYELGSKDNYVNTKANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTL
DFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIVESKFSES
LSRLDDKNLEEKLLSFIREKMSKRELDVR
>Mature_349_residues
MEQIKGNRLGFKTFKYLKVNDTEINLPDIDIKEYRIDSDPVEALDNKDFGVCQEALDMNEKSGNLFKKYKTEENQVKDFG
VIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNKKFRSSVIEINAKENSNVELFVIQTEKNTTALESVILNLDE
ESNVILSQYELGSKDNYVNTKANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTL
DFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMNRAISRDVAESMIVESKFSES
LSRLDDKNLEEKLLSFIREKMSKRELDVR

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 39711; Mature: 39711

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIKGNRLGFKTFKYLKVNDTEINLPDIDIKEYRIDSDPVEALDNKDFGVCQEALDMNE
CCCCCCCCCCCEEEEEEEECCCEECCCCCCHHEEECCCCHHHHHCCCCHHHHHHHHCCCC
KSGNLFKKYKTEENQVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNK
CCCCHHHHHCCCCHHCCCCCEEEEEECCCEEEEEECHHHEECCCCCEEEEEEECCCCCHH
KFRSSVIEINAKENSNVELFVIQTEKNTTALESVILNLDEESNVILSQYELGSKDNYVNT
HHHCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEE
KANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTL
ECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHH
DFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMN
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
RAISRDVAESMIVESKFSESLSRLDDKNLEEKLLSFIREKMSKRELDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEQIKGNRLGFKTFKYLKVNDTEINLPDIDIKEYRIDSDPVEALDNKDFGVCQEALDMNE
CCCCCCCCCCCEEEEEEEECCCEECCCCCCHHEEECCCCHHHHHCCCCHHHHHHHHCCCC
KSGNLFKKYKTEENQVKDFGVIELVTDREYDILLDTHKIVAEKNSSLRIVLDYRDNDDNK
CCCCHHHHHCCCCHHCCCCCEEEEEECCCEEEEEECHHHEECCCCCEEEEEEECCCCCHH
KFRSSVIEINAKENSNVELFVIQTEKNTTALESVILNLDEESNVILSQYELGSKDNYVNT
HHHCEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEE
KANLNGKHSYLDINSIYFTHGENSLNMLYEINHFGKESKSSCIVNGALKESSYKNFKSTL
ECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHH
DFKKGSMGSTGTEEEYAVLLSDDAKSLSVPILLAGEDDVIGNHAASAGKIDQDMLFYIMN
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
RAISRDVAESMIVESKFSESLSRLDDKNLEEKLLSFIREKMSKRELDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]