BacMap

Definition	Finegoldia magna ATCC 29328 chromosome, complete genome.
Accession	NC_010376
Length	1,797,577

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The map label for this gene is yurY [H]

Identifier: 169824166

GI number: 169824166

Start: 527145

End: 527894

Strand: Direct

Name: yurY [H]

Synonym: FMG_0469

Alternate gene names: 169824166

Gene position: 527145-527894 (Clockwise)

Preceding gene: 169824165

Following gene: 169824167

Centisome position: 29.33

GC content: 30.93

Gene sequence:

>750_bases
ATGTCAAAAAATTTATTAACTATTAAAGACTTATCCGCTAGGGTAGGCGATAAAGAAATATTAAAAAACATAAATTTAAA
TATAAACTATGGTGAAGTTCACGTTATTATGGGGCCTAATGGTTCTGGTAAGTCAACTTTAGCCAATGTTATTTTGAACA
ATCCACAATATGAAACTACTTCAGGTGATATTTTACTTGATGGAGAAAGTATTATGGATTTATCAACGGATAAAAGAGCC
AAAAAAGGTATTTTTATGTCTTTCCAAAATCCAATGGAAGTTTCAGGCATTAGTGTAGAAAATTTCATCAGAAGTGCAAA
GATTGCAAAAACTGATGAAAATATAGGATTCTTAGAATTCAGAGAAGAACTGGAAGATAATATGGATATACTTGAATTTG
ATCATGGATATTCTTCCAGATATTTGAATGTCGGTTTTTCCGGTGGTGAAAAAAAGAAGAATGAAATTCTACAAATGTTA
ATGCTACAACCAAAATTAGCAATCCTTGATGAAACAGATTCTGGTCTTGATGTTGATGCGGTTAGAACTGTATCAAAGGG
TGTAAGAGAATTCTTAAATGAAAATAATTCTGTTATTGTTATCACTCACCACAAGGAAATCTTAAAAGAAGTTAAACCAG
ATTTCGTTCATGTAATCATGGATGGTAGTATTGTAAAAGAAGGTTCTAGCGAACTTTTGGATCAAATTGAAGAAAAAGGA
TTCAATTGGATTAGAGAAGAGGTGAAATAA

Upstream 100 bases:

>100_bases
TTGCTTAAAGACTTAACTATTTTGCTATTTTCGTGTATAATATAGTAGGACATAAAATCTCTTATATATATATTTATTAC
ATAACTGTAAGGAGGTTATT

Downstream 100 bases:

>100_bases
TGGCACCTACAAAGAAGACTCAAGTTGATGAAATGGATAGAGGTATCTATGACATCAAGAATAAATTTACTTTTAGAAAG
AAAACCGAAGAGGGTTTGAC

Product: putative iron-regulated ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSKNLLTIKDLSARVGDKEILKNINLNINYGEVHVIMGPNGSGKSTLANVILNNPQYETTSGDILLDGESIMDLSTDKRA
KKGIFMSFQNPMEVSGISVENFIRSAKIAKTDENIGFLEFREELEDNMDILEFDHGYSSRYLNVGFSGGEKKKNEILQML
MLQPKLAILDETDSGLDVDAVRTVSKGVREFLNENNSVIVITHHKEILKEVKPDFVHVIMDGSIVKEGSSELLDQIEEKG
FNWIREEVK

Sequences:

>Translated_249_residues
MSKNLLTIKDLSARVGDKEILKNINLNINYGEVHVIMGPNGSGKSTLANVILNNPQYETTSGDILLDGESIMDLSTDKRA
KKGIFMSFQNPMEVSGISVENFIRSAKIAKTDENIGFLEFREELEDNMDILEFDHGYSSRYLNVGFSGGEKKKNEILQML
MLQPKLAILDETDSGLDVDAVRTVSKGVREFLNENNSVIVITHHKEILKEVKPDFVHVIMDGSIVKEGSSELLDQIEEKG
FNWIREEVK
>Mature_248_residues
SKNLLTIKDLSARVGDKEILKNINLNINYGEVHVIMGPNGSGKSTLANVILNNPQYETTSGDILLDGESIMDLSTDKRAK
KGIFMSFQNPMEVSGISVENFIRSAKIAKTDENIGFLEFREELEDNMDILEFDHGYSSRYLNVGFSGGEKKKNEILQMLM
LQPKLAILDETDSGLDVDAVRTVSKGVREFLNENNSVIVITHHKEILKEVKPDFVHVIMDGSIVKEGSSELLDQIEEKGF
NWIREEVK

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=220, Percent_Identity=30, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI73747915, Length=231, Percent_Identity=29.004329004329, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI9955963, Length=218, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI9955968, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI9955966, Length=227, Percent_Identity=26.431718061674, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI45243524, Length=227, Percent_Identity=26.431718061674, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI9961250, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI73747917, Length=169, Percent_Identity=31.9526627218935, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI171184400, Length=219, Percent_Identity=30.1369863013699, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=220, Percent_Identity=28.6363636363636, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9665248, Length=231, Percent_Identity=27.7056277056277, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI42741659, Length=231, Percent_Identity=26.4069264069264, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=44.1295546558704, Blast_Score=231, Evalue=3e-62,
Organism=Escherichia coli, GI1787029, Length=246, Percent_Identity=29.6747967479675, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=29.2682926829268, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=24.5833333333333, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=26.4227642276423, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788225, Length=237, Percent_Identity=27.8481012658228, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87082268, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790162, Length=215, Percent_Identity=28.3720930232558, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787143, Length=232, Percent_Identity=28.0172413793103, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786654, Length=232, Percent_Identity=25, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789672, Length=237, Percent_Identity=27.4261603375527, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788897, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786398, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787759, Length=252, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788644, Length=250, Percent_Identity=29.2, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=28.1818181818182, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786653, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1788053, Length=176, Percent_Identity=28.4090909090909, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=202, Percent_Identity=28.7128712871287, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787105, Length=229, Percent_Identity=27.0742358078603, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787792, Length=237, Percent_Identity=26.1603375527426, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788210, Length=227, Percent_Identity=23.3480176211454, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786319, Length=229, Percent_Identity=26.6375545851528, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=25.7510729613734, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=174, Percent_Identity=29.8850574712644, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87081834, Length=224, Percent_Identity=26.3392857142857, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI48994883, Length=244, Percent_Identity=27.4590163934426, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=243, Percent_Identity=27.5720164609054, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193202349, Length=237, Percent_Identity=29.535864978903, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115533592, Length=219, Percent_Identity=28.7671232876712, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=229, Percent_Identity=28.3842794759825, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17533971, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=238, Percent_Identity=27.3109243697479, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=216, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=218, Percent_Identity=28.8990825688073, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71996809, Length=234, Percent_Identity=23.9316239316239, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=233, Percent_Identity=27.0386266094421, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=238, Percent_Identity=24.3697478991597, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=238, Percent_Identity=25.2100840336134, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=220, Percent_Identity=28.1818181818182, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=254, Percent_Identity=27.5590551181102, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=236, Percent_Identity=24.5762711864407, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=217, Percent_Identity=24.8847926267281, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=217, Percent_Identity=27.6497695852535, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323217, Length=241, Percent_Identity=26.5560165975104, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324498, Length=243, Percent_Identity=26.3374485596708, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=215, Percent_Identity=27.4418604651163, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324585, Length=205, Percent_Identity=26.3414634146341, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21357907, Length=219, Percent_Identity=27.8538812785388, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24659289, Length=231, Percent_Identity=29.8701298701299, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24641565, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397593, Length=238, Percent_Identity=27.7310924369748, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI85726357, Length=237, Percent_Identity=25.7383966244726, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28574533, Length=231, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653245, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI161076682, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161076684, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581617, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581615, Length=222, Percent_Identity=26.1261261261261, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574744, Length=217, Percent_Identity=28.110599078341, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45552199, Length=203, Percent_Identity=27.0935960591133, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581407, Length=203, Percent_Identity=27.0935960591133, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85816269, Length=245, Percent_Identity=26.1224489795918, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24580553, Length=245, Percent_Identity=26.1224489795918, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI17136662, Length=231, Percent_Identity=25.1082251082251, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI85724864, Length=245, Percent_Identity=26.1224489795918, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24580555, Length=245, Percent_Identity=26.1224489795918, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27951; Mature: 27820

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNLLTIKDLSARVGDKEILKNINLNINYGEVHVIMGPNGSGKSTLANVILNNPQYETT
CCCCEEEHHHHHHHCCCHHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHCCCCCCCCC
SGDILLDGESIMDLSTDKRAKKGIFMSFQNPMEVSGISVENFIRSAKIAKTDENIGFLEF
CCCEEECCCHHCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
REELEDNMDILEFDHGYSSRYLNVGFSGGEKKKNEILQMLMLQPKLAILDETDSGLDVDA
HHHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
VRTVSKGVREFLNENNSVIVITHHKEILKEVKPDFVHVIMDGSIVKEGSSELLDQIEEKG
HHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCEEEEEECCCEECCCHHHHHHHHHHCC
FNWIREEVK
HHHHHHHCC
>Mature Secondary Structure 
SKNLLTIKDLSARVGDKEILKNINLNINYGEVHVIMGPNGSGKSTLANVILNNPQYETT
CCCEEEHHHHHHHCCCHHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHCCCCCCCCC
SGDILLDGESIMDLSTDKRAKKGIFMSFQNPMEVSGISVENFIRSAKIAKTDENIGFLEF
CCCEEECCCHHCCCCCCHHHHCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH
REELEDNMDILEFDHGYSSRYLNVGFSGGEKKKNEILQMLMLQPKLAILDETDSGLDVDA
HHHHHCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
VRTVSKGVREFLNENNSVIVITHHKEILKEVKPDFVHVIMDGSIVKEGSSELLDQIEEKG
HHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCEEEEEECCCEECCCHHHHHHHHHHCC
FNWIREEVK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]