| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is gltX
Identifier: 169824111
GI number: 169824111
Start: 470477
End: 471946
Strand: Direct
Name: gltX
Synonym: FMG_0414
Alternate gene names: 169824111
Gene position: 470477-471946 (Clockwise)
Preceding gene: 169824110
Following gene: 169824112
Centisome position: 26.17
GC content: 33.27
Gene sequence:
>1470_bases ATGAGTGAAGTAAGAGTAAGATTTGCTCCAAGTCCAACAGGATTTTTACACATTGGTGGACTTAGAACAGCTTTATATAA TTATTTGTATGCAAAAAGAAATAACGGTAAATTTCTTTTGAGAATTGAAGATACTGATAGAACAAGATATGTTGAAGGTG CTATCGAAAATTTGTTGGAACAATTAAAATGGGCAGGACTTGATCCAGATGAAGGAGTTGTCCTTGATGATGAAGGAAAC GTAACTGAAGTTGGAGAATGTGGTCCTTACATTCAATCTGACAGAGTAAAACAAGGATTATACCAAAAATATATCGACGA ATTAATCGAAAAAGGTTATGCATATTATTGTTTCTGTTCAAAAGAAAGATTGGATCAAGTAAAAGCACAACAAAAAGCAG ATGGTTTGATGCCAAAATACGACGGACTTTGCAGAGGAATTAGCATTGAGGATGCTAAAAAGAGAATTGCAAACGGCGAG GAATATGTTATTAGATTGAAACTTCCTGAAAACAAAGAAATCACATTTAACGATGCGATAAAAGGTAAGATTACTTTCAA CACAAATGATATGGACGATCAAGTTTTGATAAAATCTGACGGATTTCCAACTTATCACTTTGCAGTTGTAGTTGACGATC ATTTGATGGGAATTACTCACATTGTTCGTGGTGATGAATGGATTTCTTCAACAGCAAAACACGTGTATTTGTATCAATGT TTCGGATGGGATGTCCCAGAATTCGTTCACTTACCAGTTGTTTTGAACAAATCAGGTAAGAAATTATCCAAGAGAAATGA TGACGTTGCAGTTAAAGATTTCAGAAAAAAAGGATATTTGCCAGAAGCTATTGACAATTACCTAGCTTTAGTAGGTTGGT CAAGTGAAGATAACCAAGAAATTATGTCGATGGAAGAATTAAAACACAAATTTGATTTCAACAGAGTTTCAAAGTCGGGC GGAGTTTTCGACACAGAAAAATTAAACTGGATTAACAGACATTACATTAAAGAAATAGAAAATGAAAAATTAGCATCAAT GTTAAAACCATACTTGGTTGAAGATGGTGTGATTTCTGAAGATTATCCAGAATACAAATTAATAGAGATTGCTTCATTAT TCAAAGAAGAATTGGATTACATGGCAGAAATAACTGAAAAAGTTGAATTCTTGTTCAAAGATTACGAAATGGATGACGAT GCTAAGGAATTCTTAAACTACGAAAAATTAGACGAATTAATGAACGCACTAAAAGAAGAAATCGAATCTGTTGATGAAAT AGAAAAAGAATTTGCATCAGGCGTTATGAAAAAAGTTCAAAAGAAAACTGGAATCAAGGGCAAGGATTTGTGGATGACTA CAAGAGCTGTAGTTACTGGTAATGTTCACGGACCAGACTTGGATTCTATTATGGTAGTTTTAGGAAAACAAGAAGTTTTA GATAGGATTAACAAAGCTTTAAATAGATAG
Upstream 100 bases:
>100_bases AATTTGGCGAAATAATTGCCAGATTTGTATTAATAAATGTGAGATTTGGCGATTTGTGATATAATAAAATAAGTTAAATT TATTTTTTATGGGGGATATT
Downstream 100 bases:
>100_bases GAGAAGATATGAAGTTATACAATACACTGACACGAAAAAAGGAAGAATTCAAACCAATTAAAGAAAAAAATGTCGGTATA TACGTATGTGGCCCTACTGT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSEVRVRFAPSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRIEDTDRTRYVEGAIENLLEQLKWAGLDPDEGVVLDDEGN VTEVGECGPYIQSDRVKQGLYQKYIDELIEKGYAYYCFCSKERLDQVKAQQKADGLMPKYDGLCRGISIEDAKKRIANGE EYVIRLKLPENKEITFNDAIKGKITFNTNDMDDQVLIKSDGFPTYHFAVVVDDHLMGITHIVRGDEWISSTAKHVYLYQC FGWDVPEFVHLPVVLNKSGKKLSKRNDDVAVKDFRKKGYLPEAIDNYLALVGWSSEDNQEIMSMEELKHKFDFNRVSKSG GVFDTEKLNWINRHYIKEIENEKLASMLKPYLVEDGVISEDYPEYKLIEIASLFKEELDYMAEITEKVEFLFKDYEMDDD AKEFLNYEKLDELMNALKEEIESVDEIEKEFASGVMKKVQKKTGIKGKDLWMTTRAVVTGNVHGPDLDSIMVVLGKQEVL DRINKALNR
Sequences:
>Translated_489_residues MSEVRVRFAPSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRIEDTDRTRYVEGAIENLLEQLKWAGLDPDEGVVLDDEGN VTEVGECGPYIQSDRVKQGLYQKYIDELIEKGYAYYCFCSKERLDQVKAQQKADGLMPKYDGLCRGISIEDAKKRIANGE EYVIRLKLPENKEITFNDAIKGKITFNTNDMDDQVLIKSDGFPTYHFAVVVDDHLMGITHIVRGDEWISSTAKHVYLYQC FGWDVPEFVHLPVVLNKSGKKLSKRNDDVAVKDFRKKGYLPEAIDNYLALVGWSSEDNQEIMSMEELKHKFDFNRVSKSG GVFDTEKLNWINRHYIKEIENEKLASMLKPYLVEDGVISEDYPEYKLIEIASLFKEELDYMAEITEKVEFLFKDYEMDDD AKEFLNYEKLDELMNALKEEIESVDEIEKEFASGVMKKVQKKTGIKGKDLWMTTRAVVTGNVHGPDLDSIMVVLGKQEVL DRINKALNR >Mature_488_residues SEVRVRFAPSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRIEDTDRTRYVEGAIENLLEQLKWAGLDPDEGVVLDDEGNV TEVGECGPYIQSDRVKQGLYQKYIDELIEKGYAYYCFCSKERLDQVKAQQKADGLMPKYDGLCRGISIEDAKKRIANGEE YVIRLKLPENKEITFNDAIKGKITFNTNDMDDQVLIKSDGFPTYHFAVVVDDHLMGITHIVRGDEWISSTAKHVYLYQCF GWDVPEFVHLPVVLNKSGKKLSKRNDDVAVKDFRKKGYLPEAIDNYLALVGWSSEDNQEIMSMEELKHKFDFNRVSKSGG VFDTEKLNWINRHYIKEIENEKLASMLKPYLVEDGVISEDYPEYKLIEIASLFKEELDYMAEITEKVEFLFKDYEMDDDA KEFLNYEKLDELMNALKEEIESVDEIEKEFASGVMKKVQKKTGIKGKDLWMTTRAVVTGNVHGPDLDSIMVVLGKQEVLD RINKALNR
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=503, Percent_Identity=37.1769383697813, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI4826960, Length=308, Percent_Identity=26.6233766233766, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI62241042, Length=268, Percent_Identity=24.2537313432836, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1788743, Length=487, Percent_Identity=35.3182751540041, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI226510925, Length=304, Percent_Identity=34.8684210526316, Blast_Score=163, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=35.8762886597938, Blast_Score=285, Evalue=5e-77, Organism=Saccharomyces cerevisiae, GI6324540, Length=511, Percent_Identity=35.4207436399217, Blast_Score=315, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6321192, Length=310, Percent_Identity=23.8709677419355, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665321, Length=507, Percent_Identity=39.4477317554241, Blast_Score=357, Evalue=1e-98,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_FINM2 (B0S0W2)
Other databases:
- EMBL: AP008971 - RefSeq: YP_001691722.1 - ProteinModelPortal: B0S0W2 - SMR: B0S0W2 - GeneID: 6019878 - GenomeReviews: AP008971_GR - KEGG: fma:FMG_0414 - HOGENOM: HBG628189 - OMA: YRCFTSE - ProtClustDB: PRK01406 - BioCyc: FMAG334413:FMG_0414-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 56325; Mature: 56194
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 264-264
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVRVRFAPSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRIEDTDRTRYVEGAIENLLE CCCCEEEECCCCCCEEEECHHHHHHHHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHH QLKWAGLDPDEGVVLDDEGNVTEVGECGPYIQSDRVKQGLYQKYIDELIEKGYAYYCFCS HHHHCCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC KERLDQVKAQQKADGLMPKYDGLCRGISIEDAKKRIANGEEYVIRLKLPENKEITFNDAI HHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEECCCE KGKITFNTNDMDDQVLIKSDGFPTYHFAVVVDDHLMGITHIVRGDEWISSTAKHVYLYQC EEEEEECCCCCCCEEEEECCCCCEEEEEEEECCHHHHHHHHHCCCHHHHCCCCEEEEEEE FGWDVPEFVHLPVVLNKSGKKLSKRNDDVAVKDFRKKGYLPEAIDNYLALVGWSSEDNQE ECCCCHHHEEECEEECCCCCHHHCCCCCHHHHHHHHCCCCHHHHHCCEEEEECCCCCCHH IMSMEELKHKFDFNRVSKSGGVFDTEKLNWINRHYIKEIENEKLASMLKPYLVEDGVISE HHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DYPEYKLIEIASLFKEELDYMAEITEKVEFLFKDYEMDDDAKEFLNYEKLDELMNALKEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHH IESVDEIEKEFASGVMKKVQKKTGIKGKDLWMTTRAVVTGNVHGPDLDSIMVVLGKQEVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCHHHHH DRINKALNR HHHHHHHCC >Mature Secondary Structure SEVRVRFAPSPTGFLHIGGLRTALYNYLYAKRNNGKFLLRIEDTDRTRYVEGAIENLLE CCCEEEECCCCCCEEEECHHHHHHHHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHH QLKWAGLDPDEGVVLDDEGNVTEVGECGPYIQSDRVKQGLYQKYIDELIEKGYAYYCFCS HHHHCCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEC KERLDQVKAQQKADGLMPKYDGLCRGISIEDAKKRIANGEEYVIRLKLPENKEITFNDAI HHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEECCCE KGKITFNTNDMDDQVLIKSDGFPTYHFAVVVDDHLMGITHIVRGDEWISSTAKHVYLYQC EEEEEECCCCCCCEEEEECCCCCEEEEEEEECCHHHHHHHHHCCCHHHHCCCCEEEEEEE FGWDVPEFVHLPVVLNKSGKKLSKRNDDVAVKDFRKKGYLPEAIDNYLALVGWSSEDNQE ECCCCHHHEEECEEECCCCCHHHCCCCCHHHHHHHHCCCCHHHHHCCEEEEECCCCCCHH IMSMEELKHKFDFNRVSKSGGVFDTEKLNWINRHYIKEIENEKLASMLKPYLVEDGVISE HHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DYPEYKLIEIASLFKEELDYMAEITEKVEFLFKDYEMDDDAKEFLNYEKLDELMNALKEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHH IESVDEIEKEFASGVMKKVQKKTGIKGKDLWMTTRAVVTGNVHGPDLDSIMVVLGKQEVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCHHHHH DRINKALNR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA