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The map label for this gene is oppC [H]

Identifier: 169823971

GI number: 169823971

Start: 323323

End: 324243

Strand: Direct

Name: oppC [H]

Synonym: FMG_0274

Alternate gene names: 169823971

Gene position: 323323-324243 (Clockwise)

Preceding gene: 169823970

Following gene: 169823972

Centisome position: 17.99

GC content: 34.09

Gene sequence:

>921_bases
ATGAAAGAAGTAAAAGTAACAGAAGAAAAGCTTGAAGAATATAAAGACCTTGCACATGATAATCCAACTGGATTTAAAGT
AATAGTCAATGAATTCAAAAAAGACAAATTAGCCATAATATCTTTAGTAGTATTAGCGGTTTTGTGGATAGGAATATTTG
TTGGAGCAATGTTGCTTGATAAAAAACAAGTAATGATGGTAGATATTATGAATTCATATGTACCACCTGGAGAGGCTGGA
CATATTTTAGGTACAGATCAAGGTGGTAGAGATTTGTTCGGACAATTGATAATCGGAGCTAGAAACTCTATTGTAATAGG
AATTGCTGTAACAGTACTTACATCTGCTATAGGCATAGTTGTAGGATTGTTGATAGGCTATTACGGCGGATGGTTGGACA
ATATTATAATGAGAATTATAGATTTCATCCAAATTCTTCCAACGATGATGATTATCATAGTATTCGTAACTATTGTTCCA
AAATATTCGATGTTTACATTTGTAATGATATTTACAGTGTTCTACTGGACAGGAATGGCGAGACTTGTAAGATCAAAAGC
TCTAGCTGAAAGCAAGAAAGACTATGTAAATGCATCGAAGACAATGGGAACTAGCGATTTGAAGACGATGTTTACAGGAA
TATTACCAAATATTTCTTCAATATTAATAGTAGATATGACATTAAGTTTCGCCGGTAACATCGGTATTGAAACTGGACTA
AGCTTTCTAGGTTTTGGGCTTCCACCATCAGATCCATCACTTGGAACGTTGGTATCATTAGCCAGAAAACCAGAAGTTAT
TCAAGACAAATTATATGTATGGTTACCCGCATCATTATTGATATTGGTAATGATGTTGTGTATAAATTACATCGGTCAAG
CATTAAGAAGAGCTTCCGATGCAAAACAAAGGAAAGGATAA

Upstream 100 bases:

>100_bases
TGTTATGATATATGGATTCTTGACACTTTGTGGTTCATTATTAAGTGATATTATCATGAGTATAGTGGATCCAAGAATAA
GGATAGAATAGGAGGTTTTT

Downstream 100 bases:

>100_bases
GGGTGAAAATAATGAAAAAGAAATTCAAATCATTATTAGCTATCTTTTTAGTATTAGCATTCGTACTTACTGGATGTGGA
AATTCAAAGAAAGATAGCGG

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKEVKVTEEKLEEYKDLAHDNPTGFKVIVNEFKKDKLAIISLVVLAVLWIGIFVGAMLLDKKQVMMVDIMNSYVPPGEAG
HILGTDQGGRDLFGQLIIGARNSIVIGIAVTVLTSAIGIVVGLLIGYYGGWLDNIIMRIIDFIQILPTMMIIIVFVTIVP
KYSMFTFVMIFTVFYWTGMARLVRSKALAESKKDYVNASKTMGTSDLKTMFTGILPNISSILIVDMTLSFAGNIGIETGL
SFLGFGLPPSDPSLGTLVSLARKPEVIQDKLYVWLPASLLILVMMLCINYIGQALRRASDAKQRKG

Sequences:

>Translated_306_residues
MKEVKVTEEKLEEYKDLAHDNPTGFKVIVNEFKKDKLAIISLVVLAVLWIGIFVGAMLLDKKQVMMVDIMNSYVPPGEAG
HILGTDQGGRDLFGQLIIGARNSIVIGIAVTVLTSAIGIVVGLLIGYYGGWLDNIIMRIIDFIQILPTMMIIIVFVTIVP
KYSMFTFVMIFTVFYWTGMARLVRSKALAESKKDYVNASKTMGTSDLKTMFTGILPNISSILIVDMTLSFAGNIGIETGL
SFLGFGLPPSDPSLGTLVSLARKPEVIQDKLYVWLPASLLILVMMLCINYIGQALRRASDAKQRKG
>Mature_306_residues
MKEVKVTEEKLEEYKDLAHDNPTGFKVIVNEFKKDKLAIISLVVLAVLWIGIFVGAMLLDKKQVMMVDIMNSYVPPGEAG
HILGTDQGGRDLFGQLIIGARNSIVIGIAVTVLTSAIGIVVGLLIGYYGGWLDNIIMRIIDFIQILPTMMIIIVFVTIVP
KYSMFTFVMIFTVFYWTGMARLVRSKALAESKKDYVNASKTMGTSDLKTMFTGILPNISSILIVDMTLSFAGNIGIETGL
SFLGFGLPPSDPSLGTLVSLARKPEVIQDKLYVWLPASLLILVMMLCINYIGQALRRASDAKQRKG

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=282, Percent_Identity=30.4964539007092, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789964, Length=233, Percent_Identity=36.480686695279, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787498, Length=304, Percent_Identity=31.5789473684211, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1788505, Length=257, Percent_Identity=29.1828793774319, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787760, Length=239, Percent_Identity=30.9623430962343, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=28.3898305084746, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787549, Length=282, Percent_Identity=25.886524822695, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33664; Mature: 33664

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVKVTEEKLEEYKDLAHDNPTGFKVIVNEFKKDKLAIISLVVLAVLWIGIFVGAMLLD
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKQVMMVDIMNSYVPPGEAGHILGTDQGGRDLFGQLIIGARNSIVIGIAVTVLTSAIGIV
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGLLIGYYGGWLDNIIMRIIDFIQILPTMMIIIVFVTIVPKYSMFTFVMIFTVFYWTGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RLVRSKALAESKKDYVNASKTMGTSDLKTMFTGILPNISSILIVDMTLSFAGNIGIETGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
SFLGFGLPPSDPSLGTLVSLARKPEVIQDKLYVWLPASLLILVMMLCINYIGQALRRASD
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKQRKG
HHHCCC
>Mature Secondary Structure
MKEVKVTEEKLEEYKDLAHDNPTGFKVIVNEFKKDKLAIISLVVLAVLWIGIFVGAMLLD
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KKQVMMVDIMNSYVPPGEAGHILGTDQGGRDLFGQLIIGARNSIVIGIAVTVLTSAIGIV
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VGLLIGYYGGWLDNIIMRIIDFIQILPTMMIIIVFVTIVPKYSMFTFVMIFTVFYWTGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RLVRSKALAESKKDYVNASKTMGTSDLKTMFTGILPNISSILIVDMTLSFAGNIGIETGL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
SFLGFGLPPSDPSLGTLVSLARKPEVIQDKLYVWLPASLLILVMMLCINYIGQALRRASD
HHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKQRKG
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244921; 11337471 [H]