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The map label for this gene is oppB [H]

Identifier: 169823970

GI number: 169823970

Start: 322345

End: 323313

Strand: Direct

Name: oppB [H]

Synonym: FMG_0273

Alternate gene names: 169823970

Gene position: 322345-323313 (Clockwise)

Preceding gene: 169823969

Following gene: 169823971

Centisome position: 17.93

GC content: 34.88

Gene sequence:

>969_bases
ATGACTAAAACAATAATAAGACGATTTTTAATAATGATTCCTCAATTGATAGTATTAAGTTTATTTATATTCTTTGTAGC
TCAAAAGATGCCAGGTGACCCTTTCACAGGAAAAATCACACCAAGCACTGGTAACTCAAAGGTTGAAGAAGAACTTAAGA
TAAAATCAGGATTTTACGATCCATGGTATGTAAAATATAAAAGATGGGTTGGAAATGCAGTAAAAGGAGATTTTGGTGAT
TCATATACTCAAAAACTACCTGTAAAAGACGTTATAGGTCAAAGAGCTAAGAACACATTCTTCTTATCATTGTTCTCATT
ATTAATAATGTATGCAATTGCAATTCCATTGGGAATAAATGCAGGTAGGTATGACGGATCGCTGTTCGATCAGGGAGTTA
ACTTGTATAACTTCTTGGCACTAGCAACCCCGGGCTTCGTATTCTATTTGATAATGTTATTGATTTTCGGATATAAGCTT
GGATGGTTCCCAACAAGTGGAATCATAAGCCTTGAAGCCTCAGCAAAAGGCGGCATGGCAGCAGTATTAAGTAGAATATA
TCATATGCTACTTCCAGCAATATCTTATGCATTACTTACAACTATTGGAACTATCCAATATTTAAGAAATGAAGTTGTAG
ATGCAAAAAGCCAAGACTACGTAAGAACTGCGAGAGCAAAAGGGGTTCCTATCAAAAAAGTTTACAGCAAACACATTTTT
AGAAACTCACTTTTACCAATAGCTGCATTCTTCGGATTCCAAATCACAGGATTATTAGCAGGTTCTATCATGATTGAAAC
AATTTTCGGTTACCAAGGAATGGGTTCACTATTCGTTGACTGTATCAACCAAAGAGACTACTCAGTTATGACAGCGCTTG
TTATGATATATGGATTCTTGACACTTTGTGGTTCATTATTAAGTGATATTATCATGAGTATAGTGGATCCAAGAATAAGG
ATAGAATAG

Upstream 100 bases:

>100_bases
GAACAAAAGAATGTCTACTACGATGAAAACGGATCAGTGTACGATTTAAAGAAGTACAAAGATTCTCATTATGTAGCGGC
TAGAAAGGGGGAAATATAAT

Downstream 100 bases:

>100_bases
GAGGTTTTTATGAAAGAAGTAAAAGTAACAGAAGAAAAGCTTGAAGAATATAAAGACCTTGCACATGATAATCCAACTGG
ATTTAAAGTAATAGTCAATG

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTKTIIRRFLIMIPQLIVLSLFIFFVAQKMPGDPFTGKITPSTGNSKVEEELKIKSGFYDPWYVKYKRWVGNAVKGDFGD
SYTQKLPVKDVIGQRAKNTFFLSLFSLLIMYAIAIPLGINAGRYDGSLFDQGVNLYNFLALATPGFVFYLIMLLIFGYKL
GWFPTSGIISLEASAKGGMAAVLSRIYHMLLPAISYALLTTIGTIQYLRNEVVDAKSQDYVRTARAKGVPIKKVYSKHIF
RNSLLPIAAFFGFQITGLLAGSIMIETIFGYQGMGSLFVDCINQRDYSVMTALVMIYGFLTLCGSLLSDIIMSIVDPRIR
IE

Sequences:

>Translated_322_residues
MTKTIIRRFLIMIPQLIVLSLFIFFVAQKMPGDPFTGKITPSTGNSKVEEELKIKSGFYDPWYVKYKRWVGNAVKGDFGD
SYTQKLPVKDVIGQRAKNTFFLSLFSLLIMYAIAIPLGINAGRYDGSLFDQGVNLYNFLALATPGFVFYLIMLLIFGYKL
GWFPTSGIISLEASAKGGMAAVLSRIYHMLLPAISYALLTTIGTIQYLRNEVVDAKSQDYVRTARAKGVPIKKVYSKHIF
RNSLLPIAAFFGFQITGLLAGSIMIETIFGYQGMGSLFVDCINQRDYSVMTALVMIYGFLTLCGSLLSDIIMSIVDPRIR
IE
>Mature_321_residues
TKTIIRRFLIMIPQLIVLSLFIFFVAQKMPGDPFTGKITPSTGNSKVEEELKIKSGFYDPWYVKYKRWVGNAVKGDFGDS
YTQKLPVKDVIGQRAKNTFFLSLFSLLIMYAIAIPLGINAGRYDGSLFDQGVNLYNFLALATPGFVFYLIMLLIFGYKLG
WFPTSGIISLEASAKGGMAAVLSRIYHMLLPAISYALLTTIGTIQYLRNEVVDAKSQDYVRTARAKGVPIKKVYSKHIFR
NSLLPIAAFFGFQITGLLAGSIMIETIFGYQGMGSLFVDCINQRDYSVMTALVMIYGFLTLCGSLLSDIIMSIVDPRIRI
E

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=320, Percent_Identity=30, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1789965, Length=341, Percent_Identity=28.4457478005865, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1789888, Length=322, Percent_Identity=29.8136645962733, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787497, Length=321, Percent_Identity=28.6604361370716, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=29.2817679558011, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787550, Length=265, Percent_Identity=26.0377358490566, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787761, Length=310, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35969; Mature: 35838

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTIIRRFLIMIPQLIVLSLFIFFVAQKMPGDPFTGKITPSTGNSKVEEELKIKSGFYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCC
PWYVKYKRWVGNAVKGDFGDSYTQKLPVKDVIGQRAKNTFFLSLFSLLIMYAIAIPLGIN
HHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AGRYDGSLFDQGVNLYNFLALATPGFVFYLIMLLIFGYKLGWFPTSGIISLEASAKGGMA
CCCCCCHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHH
AVLSRIYHMLLPAISYALLTTIGTIQYLRNEVVDAKSQDYVRTARAKGVPIKKVYSKHIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHH
RNSLLPIAAFFGFQITGLLAGSIMIETIFGYQGMGSLFVDCINQRDYSVMTALVMIYGFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
TLCGSLLSDIIMSIVDPRIRIE
HHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
TKTIIRRFLIMIPQLIVLSLFIFFVAQKMPGDPFTGKITPSTGNSKVEEELKIKSGFYD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHCCCCC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HHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244921; 11337471 [H]