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The map label for this gene is oppA [H]

Identifier: 169823972

GI number: 169823972

Start: 324255

End: 326108

Strand: Direct

Name: oppA [H]

Synonym: FMG_0275

Alternate gene names: 169823972

Gene position: 324255-326108 (Clockwise)

Preceding gene: 169823971

Following gene: 169823973

Centisome position: 18.04

GC content: 36.03

Gene sequence:

>1854_bases
ATGAAAAAGAAATTCAAATCATTATTAGCTATCTTTTTAGTATTAGCATTCGTACTTACTGGATGTGGAAATTCAAAGAA
AGATAGCGGAAAATCTTCAGACTCAGGTTCTAAACAAGAATCTAGTACTGGAAAGAAAGTTAATGAAGAAAACAAGGGCA
ACATAGTCGGAGAAAAAATGGGCGGCGGTGTTGTTGTTGAAAACGAAGGCGAACCAATTAAAGGTGGTACATTTAGAGTA
GGTATTCCTACAGACTCACCATTTAAAGGTATATTCAACAACACATTATACGATGACAACTACGACTGGAACATCATTGG
ACCTACAATGTATACAGCAGCAAACGCTGGAGAAAGCTTGGAATTGAGAGATTCTGGAGCTGAAAAATTTGAATGGGATG
AAAAAGCAAAAACTGCTACTATTAAACTTTCAGACTCATTCAAATGGAATGATGGAAAACCAGTTACTGCAAAAGACATT
ATAATCAACTACCTAATCATCGGTCACAAGGACTATCCTGGTGTACGTTATGATGATGATATGATTAATATCGTTGGTAT
GGAAGATTATCACGCTGGAAAAACAAAAGACATTTCTGGTGTTAAAGAAATCGACAACAAAACAGTTCAAATCCAATTTA
AAGAATGGGTACCATCAATCAAATGGGGCGCTGGAATCTGGGCTGAACCAAATAGCTATGATCAATTAAAAGATATACCA
GTAAAAGATATAATCTCTTCTGACCCAGTTAGAAAGAACCCTAAATCAGCAGGACCTTTCTACATTTCAAATGTAGTTCC
TGGACAATCAGTTGAATTTTCAGCTAACGAACACTTCTGGGGTGGAAAACCAAAAATCGATAAAGTTGTAATGGAAAGAG
TTCCAAGTTCACAAATCTTAGCTTCATTAAAAGCTGGCAAATACGACTATATCGCAGGTGGAGCACCTTCAGATACATTC
AAAGAAATATCAGAATTAAAAGGATACAAAGTAGCAAGATTCCAAGATATGGCTTACACTTACTTAGGATTTAAATTAGG
TAAATGGGACAAAGCTAAAGGCGAAGTTGTTGTAGATCCTAACGCTAAGATGGCAGATGTTAACTTACGTAAAGCTATGG
GTTACGCAGTTGACAACAATGCTGTTGGTGAAAAATTCTATTTAGGATACAGATCACAAGCAACATCAGTTATAATTCCA
ATCTTCAAGGACTACTTCAATACAGACCTTAAAGGATACAACTACGATCCAGAAAAAGCTAAAAAATTATTAGACGAAGC
TGGATATAAAGACGTTAACAACGATGGATTCAGAGAAGACAAAAATGGTAAACCATTGGTAATCAAATTTGCTTCAATGG
CAGGTGGAGATATCGCTGAACCATTAGCAAAATACTACATGCAATGTTGGGAACAAGTAGGATTGAAAGTTGAATTAACA
GGCGGAAGACTAATCGAATTCAACGCATTCTATGACAAACTTAAAAACGACGATCCAGAAATCGACGTATTCCAAGGTGC
ATGGTCAACCGGTACTAACCCTGATCCATCAGGATTATTCAGTAAGAATGCATCATTCAACTACTACAGATACACTAATC
CAGAAATGCAAAAAGCATTGGATAAGATTTCTGATGGTAAAACATCTGATGAAGATAGAGCACAAGCTTACAAAGACTTC
GCTAAAGTAATGGAAGACAATGTACCATTGATTCCAACACTTTACAGAGAAGCTTTATCTCCAATCAACAAGAGAGTTAA
GAAGTTTGATTTCAGATACGTTCAAGATCTTAACAAAGATGACTTCAGATGGAATCAAATCGAACTTACAGCAGAAGAAC
CTCTAAAAGAATAA

Upstream 100 bases:

>100_bases
CATTATTGATATTGGTAATGATGTTGTGTATAAATTACATCGGTCAAGCATTAAGAAGAGCTTCCGATGCAAAACAAAGG
AAAGGATAAGGGTGAAAATA

Downstream 100 bases:

>100_bases
TAGATTTTAGAATTAGTGGGGTGTAAATTTACACTCCACTTTTTTGTGCAAAATCTGTAAAAATAGGTAAAATATAACGT
TTTCGTTTATTGACTTATTC

Product: oligopeptide ABC transporter substrate-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKKKFKSLLAIFLVLAFVLTGCGNSKKDSGKSSDSGSKQESSTGKKVNEENKGNIVGEKMGGGVVVENEGEPIKGGTFRV
GIPTDSPFKGIFNNTLYDDNYDWNIIGPTMYTAANAGESLELRDSGAEKFEWDEKAKTATIKLSDSFKWNDGKPVTAKDI
IINYLIIGHKDYPGVRYDDDMINIVGMEDYHAGKTKDISGVKEIDNKTVQIQFKEWVPSIKWGAGIWAEPNSYDQLKDIP
VKDIISSDPVRKNPKSAGPFYISNVVPGQSVEFSANEHFWGGKPKIDKVVMERVPSSQILASLKAGKYDYIAGGAPSDTF
KEISELKGYKVARFQDMAYTYLGFKLGKWDKAKGEVVVDPNAKMADVNLRKAMGYAVDNNAVGEKFYLGYRSQATSVIIP
IFKDYFNTDLKGYNYDPEKAKKLLDEAGYKDVNNDGFREDKNGKPLVIKFASMAGGDIAEPLAKYYMQCWEQVGLKVELT
GGRLIEFNAFYDKLKNDDPEIDVFQGAWSTGTNPDPSGLFSKNASFNYYRYTNPEMQKALDKISDGKTSDEDRAQAYKDF
AKVMEDNVPLIPTLYREALSPINKRVKKFDFRYVQDLNKDDFRWNQIELTAEEPLKE

Sequences:

>Translated_617_residues
MKKKFKSLLAIFLVLAFVLTGCGNSKKDSGKSSDSGSKQESSTGKKVNEENKGNIVGEKMGGGVVVENEGEPIKGGTFRV
GIPTDSPFKGIFNNTLYDDNYDWNIIGPTMYTAANAGESLELRDSGAEKFEWDEKAKTATIKLSDSFKWNDGKPVTAKDI
IINYLIIGHKDYPGVRYDDDMINIVGMEDYHAGKTKDISGVKEIDNKTVQIQFKEWVPSIKWGAGIWAEPNSYDQLKDIP
VKDIISSDPVRKNPKSAGPFYISNVVPGQSVEFSANEHFWGGKPKIDKVVMERVPSSQILASLKAGKYDYIAGGAPSDTF
KEISELKGYKVARFQDMAYTYLGFKLGKWDKAKGEVVVDPNAKMADVNLRKAMGYAVDNNAVGEKFYLGYRSQATSVIIP
IFKDYFNTDLKGYNYDPEKAKKLLDEAGYKDVNNDGFREDKNGKPLVIKFASMAGGDIAEPLAKYYMQCWEQVGLKVELT
GGRLIEFNAFYDKLKNDDPEIDVFQGAWSTGTNPDPSGLFSKNASFNYYRYTNPEMQKALDKISDGKTSDEDRAQAYKDF
AKVMEDNVPLIPTLYREALSPINKRVKKFDFRYVQDLNKDDFRWNQIELTAEEPLKE
>Mature_617_residues
MKKKFKSLLAIFLVLAFVLTGCGNSKKDSGKSSDSGSKQESSTGKKVNEENKGNIVGEKMGGGVVVENEGEPIKGGTFRV
GIPTDSPFKGIFNNTLYDDNYDWNIIGPTMYTAANAGESLELRDSGAEKFEWDEKAKTATIKLSDSFKWNDGKPVTAKDI
IINYLIIGHKDYPGVRYDDDMINIVGMEDYHAGKTKDISGVKEIDNKTVQIQFKEWVPSIKWGAGIWAEPNSYDQLKDIP
VKDIISSDPVRKNPKSAGPFYISNVVPGQSVEFSANEHFWGGKPKIDKVVMERVPSSQILASLKAGKYDYIAGGAPSDTF
KEISELKGYKVARFQDMAYTYLGFKLGKWDKAKGEVVVDPNAKMADVNLRKAMGYAVDNNAVGEKFYLGYRSQATSVIIP
IFKDYFNTDLKGYNYDPEKAKKLLDEAGYKDVNNDGFREDKNGKPLVIKFASMAGGDIAEPLAKYYMQCWEQVGLKVELT
GGRLIEFNAFYDKLKNDDPEIDVFQGAWSTGTNPDPSGLFSKNASFNYYRYTNPEMQKALDKISDGKTSDEDRAQAYKDF
AKVMEDNVPLIPTLYREALSPINKRVKKFDFRYVQDLNKDDFRWNQIELTAEEPLKE

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=499, Percent_Identity=25.6513026052104, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789887, Length=337, Percent_Identity=26.7062314540059, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787551, Length=390, Percent_Identity=21.025641025641, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69132; Mature: 69132

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFKSLLAIFLVLAFVLTGCGNSKKDSGKSSDSGSKQESSTGKKVNEENKGNIVGEKM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
GGGVVVENEGEPIKGGTFRVGIPTDSPFKGIFNNTLYDDNYDWNIIGPTMYTAANAGESL
CCCEEECCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCHHEECCCCCCEE
ELRDSGAEKFEWDEKAKTATIKLSDSFKWNDGKPVTAKDIIINYLIIGHKDYPGVRYDDD
EECCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCCCC
MINIVGMEDYHAGKTKDISGVKEIDNKTVQIQFKEWVPSIKWGAGIWAEPNSYDQLKDIP
EEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHCCC
VKDIISSDPVRKNPKSAGPFYISNVVPGQSVEFSANEHFWGGKPKIDKVVMERVPSSQIL
HHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHH
ASLKAGKYDYIAGGAPSDTFKEISELKGYKVARFQDMAYTYLGFKLGKWDKAKGEVVVDP
HHHHCCCEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCEEECCCCCCCCCEEECC
NAKMADVNLRKAMGYAVDNNAVGEKFYLGYRSQATSVIIPIFKDYFNTDLKGYNYDPEKA
CCCEECCHHHHHHCEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCCCHHHH
KKLLDEAGYKDVNNDGFREDKNGKPLVIKFASMAGGDIAEPLAKYYMQCWEQVGLKVELT
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GGRLIEFNAFYDKLKNDDPEIDVFQGAWSTGTNPDPSGLFSKNASFNYYRYTNPEMQKAL
CCEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHH
DKISDGKTSDEDRAQAYKDFAKVMEDNVPLIPTLYREALSPINKRVKKFDFRYVQDLNKD
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DFRWNQIELTAEEPLKE
CCEEEEEEEECCCCCCC
>Mature Secondary Structure
MKKKFKSLLAIFLVLAFVLTGCGNSKKDSGKSSDSGSKQESSTGKKVNEENKGNIVGEKM
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
GGGVVVENEGEPIKGGTFRVGIPTDSPFKGIFNNTLYDDNYDWNIIGPTMYTAANAGESL
CCCEEECCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCEEEECCHHEECCCCCCEE
ELRDSGAEKFEWDEKAKTATIKLSDSFKWNDGKPVTAKDIIINYLIIGHKDYPGVRYDDD
EECCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCCHHHEEEEEEEEECCCCCCCCCCCC
MINIVGMEDYHAGKTKDISGVKEIDNKTVQIQFKEWVPSIKWGAGIWAEPNSYDQLKDIP
EEEEEECCCCCCCCCCCCCCHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCCCCHHHHCCC
VKDIISSDPVRKNPKSAGPFYISNVVPGQSVEFSANEHFWGGKPKIDKVVMERVPSSQIL
HHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHH
ASLKAGKYDYIAGGAPSDTFKEISELKGYKVARFQDMAYTYLGFKLGKWDKAKGEVVVDP
HHHHCCCEEEECCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHCEEECCCCCCCCCEEECC
NAKMADVNLRKAMGYAVDNNAVGEKFYLGYRSQATSVIIPIFKDYFNTDLKGYNYDPEKA
CCCEECCHHHHHHCEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHCCCCCCCCCCHHHH
KKLLDEAGYKDVNNDGFREDKNGKPLVIKFASMAGGDIAEPLAKYYMQCWEQVGLKVELT
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEC
GGRLIEFNAFYDKLKNDDPEIDVFQGAWSTGTNPDPSGLFSKNASFNYYRYTNPEMQKAL
CCEEEEEHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHH
DKISDGKTSDEDRAQAYKDFAKVMEDNVPLIPTLYREALSPINKRVKKFDFRYVQDLNKD
HHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DFRWNQIELTAEEPLKE
CCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]