| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629494
Identifier: 169629494
GI number: 169629494
Start: 2464781
End: 2466616
Strand: Reverse
Name: 169629494
Synonym: MAB_2408c
Alternate gene names: NA
Gene position: 2466616-2464781 (Counterclockwise)
Preceding gene: 169629495
Following gene: 169629479
Centisome position: 48.68
GC content: 66.45
Gene sequence:
>1836_bases ATGGGCAGGCACAGCGCATCTGGGTCGGGTAGCCCAAACGATCCGGAAGACAACGATGGCTGGGAAGCGGACTCCGCGCC GGGCTCTGAGTCGGGCTCGGGTTCGGAGTTCGACACCGGCAGCTGGCAGCGATCACATCGCAGTGGCGGTAGCAACTGGG GTGTGAGCAAGGGGCTGATCGGCGCCGTCGCGGCCGTCCTGGTCGTAGCGGTGTCCATCGGGCTGTGGTGGTACTTCGAT CGGCGGACCTCCGACAACCAGGCCGAGGCCGCTGCTACCTGCGTGCACGGAAACAACGCCATCGCCGTGGTTGCTGACCC GTCCATCGCGGACCGAATCGGCGAACTGTCGGAGCGGTTCAACCAGAAGCACGAAGTGATCGGCGACTACTGCTTCACCG TGTCGGTGCGGCCCGCGGACTCGGCCAATGTGATCAAGGGGCTTACCGGCCAGTGGCCCGCGGAACTTGGTGAGCAGCCG GCATTGTGGATACCCGGGAGCTCGATCTCCTCGGCCCGCCTGAAGGCGGCCTCCAAGACCAATATCGTCAGCGACAGTCG CAGCCTGGTGAGCACGCCCGTCGTCATCGCGGTGACGCCGAAATTGCGCCAGGCCATTCCGAACGACAAGAGCTGGGCGG ATGTGCCTGCGCTGCAGAACGTTCCGAACTCGCTCGATGGTGTCGGCCTTCCCGGCTGGGGCTCGCTGCGACTGGCCCTA CCGTCGAGCGGCAACGCCGACGCGGCGCAGCTCGCCGCCGAAGCGGTAGCGGCCGCCAGTGTCCGCCCGGGTGATTCACC CGAGCTGGGCGCGGGTGCTGCCGGTTCCTTGGCGGCGACGGCTCCAAAGCTGCCCGCCAACAACGTGGCCGACGCCATCG GCGCGCTACTGGATGGCGGCGAGCAGCCCGGCGCGGCCGTCCATGCGGTGGTCACCACCGAACAGCAGCTTTATGCGCGC ACCCGCAACAACGGAGACGCCAAGAAAGTCATCGCCCAGTGGCAACCGGCCGGGGCGACCCCCATCGCCGACTACCCCAC CGTGCAGTTGGACGGTGCATGGCTTTCTGAGGAACAGCACACCGCAGCAAGCCAATTCGCGCGTTTCCTGGGCGACAAGG ACCAGATCAAGGACCTGGCCGCGGCCGGTTTCCGCGCCGAGGGCACGGACCTTCCCACCAGCGACGTGGTGAGCTTCGCC AAGATCGACAAGCCGCTGAGCATTGAGGACAAGGTGCGCGTCGCCCTGGCCGACGGCACTTCGACGGGGTCCGGCACCAC GACGATCATGTTGGCCTCGTCACCAGCTCCCGATGCGAAATTGTCGGATATCACCGGGCCCCTGGCCAACCGCGTTCGCG CCCTCGCTCCGGGTTCGGGCATCGGCCTCTGGGTCTACGACGGCAAGGAAGGCAACACCGTGGTGCGCCTCGGCGGTGCC GGCGATGATGTGGAGGGGATGCCCCGTTCGCAGAGCGTCGCCGACGCACTGACGGCGCTGCAGCCCACCGGTAACGGCGC CGTGGCGTACACCACCCTGAGAGCCCTGTACCAGGACGCCGTCGCTGGTTTCCGCCCCAATCAGGTGAACTCGGTGTTGG TAGTGGCGGGACGTTCGCACACCGACCAGACCTTGGACGGACCCGGCCTGATCGATACCATCAACCGGCTCAAGGATCCG GCGAAACCGGTGCGTATCAATGTGCTCGACTTTGGCGCCGACTCCGATCAGCAGACCTGGCAGACCATCGCCCAGCAGAG CGGTGGCGCCTATCAGAACGTGTCGGCATCGAACAGCCCGGAGCTGGCCGCGGCCATCGCGCGTTTCATTTCATAA
Upstream 100 bases:
>100_bases TCGGCGGTCAGGGACAGTAGACTCGGGCCGACGCGCGGCGGTGCTCGGACACGGCCGTAGGACAAGTACCTAGACAGGAT CAGAGGGGTCGCGACAACAC
Downstream 100 bases:
>100_bases CCCTCCTCCGCGAGCAGACGTTCGGTGCACGGCCCTCTCCTGGGCTTTGGTGCACCGAGCGTCTGCTCGCGTGTGAGGAG CTACTGTGCGAAGGCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MGRHSASGSGSPNDPEDNDGWEADSAPGSESGSGSEFDTGSWQRSHRSGGSNWGVSKGLIGAVAAVLVVAVSIGLWWYFD RRTSDNQAEAAATCVHGNNAIAVVADPSIADRIGELSERFNQKHEVIGDYCFTVSVRPADSANVIKGLTGQWPAELGEQP ALWIPGSSISSARLKAASKTNIVSDSRSLVSTPVVIAVTPKLRQAIPNDKSWADVPALQNVPNSLDGVGLPGWGSLRLAL PSSGNADAAQLAAEAVAAASVRPGDSPELGAGAAGSLAATAPKLPANNVADAIGALLDGGEQPGAAVHAVVTTEQQLYAR TRNNGDAKKVIAQWQPAGATPIADYPTVQLDGAWLSEEQHTAASQFARFLGDKDQIKDLAAAGFRAEGTDLPTSDVVSFA KIDKPLSIEDKVRVALADGTSTGSGTTTIMLASSPAPDAKLSDITGPLANRVRALAPGSGIGLWVYDGKEGNTVVRLGGA GDDVEGMPRSQSVADALTALQPTGNGAVAYTTLRALYQDAVAGFRPNQVNSVLVVAGRSHTDQTLDGPGLIDTINRLKDP AKPVRINVLDFGADSDQQTWQTIAQQSGGAYQNVSASNSPELAAAIARFIS
Sequences:
>Translated_611_residues MGRHSASGSGSPNDPEDNDGWEADSAPGSESGSGSEFDTGSWQRSHRSGGSNWGVSKGLIGAVAAVLVVAVSIGLWWYFD RRTSDNQAEAAATCVHGNNAIAVVADPSIADRIGELSERFNQKHEVIGDYCFTVSVRPADSANVIKGLTGQWPAELGEQP ALWIPGSSISSARLKAASKTNIVSDSRSLVSTPVVIAVTPKLRQAIPNDKSWADVPALQNVPNSLDGVGLPGWGSLRLAL PSSGNADAAQLAAEAVAAASVRPGDSPELGAGAAGSLAATAPKLPANNVADAIGALLDGGEQPGAAVHAVVTTEQQLYAR TRNNGDAKKVIAQWQPAGATPIADYPTVQLDGAWLSEEQHTAASQFARFLGDKDQIKDLAAAGFRAEGTDLPTSDVVSFA KIDKPLSIEDKVRVALADGTSTGSGTTTIMLASSPAPDAKLSDITGPLANRVRALAPGSGIGLWVYDGKEGNTVVRLGGA GDDVEGMPRSQSVADALTALQPTGNGAVAYTTLRALYQDAVAGFRPNQVNSVLVVAGRSHTDQTLDGPGLIDTINRLKDP AKPVRINVLDFGADSDQQTWQTIAQQSGGAYQNVSASNSPELAAAIARFIS >Mature_610_residues GRHSASGSGSPNDPEDNDGWEADSAPGSESGSGSEFDTGSWQRSHRSGGSNWGVSKGLIGAVAAVLVVAVSIGLWWYFDR RTSDNQAEAAATCVHGNNAIAVVADPSIADRIGELSERFNQKHEVIGDYCFTVSVRPADSANVIKGLTGQWPAELGEQPA LWIPGSSISSARLKAASKTNIVSDSRSLVSTPVVIAVTPKLRQAIPNDKSWADVPALQNVPNSLDGVGLPGWGSLRLALP SSGNADAAQLAAEAVAAASVRPGDSPELGAGAAGSLAATAPKLPANNVADAIGALLDGGEQPGAAVHAVVTTEQQLYART RNNGDAKKVIAQWQPAGATPIADYPTVQLDGAWLSEEQHTAASQFARFLGDKDQIKDLAAAGFRAEGTDLPTSDVVSFAK IDKPLSIEDKVRVALADGTSTGSGTTTIMLASSPAPDAKLSDITGPLANRVRALAPGSGIGLWVYDGKEGNTVVRLGGAG DDVEGMPRSQSVADALTALQPTGNGAVAYTTLRALYQDAVAGFRPNQVNSVLVVAGRSHTDQTLDGPGLIDTINRLKDPA KPVRINVLDFGADSDQQTWQTIAQQSGGAYQNVSASNSPELAAAIARFIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62969; Mature: 62838
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHSASGSGSPNDPEDNDGWEADSAPGSESGSGSEFDTGSWQRSHRSGGSNWGVSKGLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH GAVAAVLVVAVSIGLWWYFDRRTSDNQAEAAATCVHGNNAIAVVADPSIADRIGELSERF HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEECCCEEEEEECCHHHHHHHHHHHHH NQKHEVIGDYCFTVSVRPADSANVIKGLTGQWPAELGEQPALWIPGSSISSARLKAASKT HHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHC NIVSDSRSLVSTPVVIAVTPKLRQAIPNDKSWADVPALQNVPNSLDGVGLPGWGSLRLAL CCCCCCHHHHCCCEEEEECHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEC PSSGNADAAQLAAEAVAAASVRPGDSPELGAGAAGSLAATAPKLPANNVADAIGALLDGG CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC EQPGAAVHAVVTTEQQLYARTRNNGDAKKVIAQWQPAGATPIADYPTVQLDGAWLSEEQH CCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHH TAASQFARFLGDKDQIKDLAAAGFRAEGTDLPTSDVVSFAKIDKPLSIEDKVRVALADGT HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCC STGSGTTTIMLASSPAPDAKLSDITGPLANRVRALAPGSGIGLWVYDGKEGNTVVRLGGA CCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCC GDDVEGMPRSQSVADALTALQPTGNGAVAYTTLRALYQDAVAGFRPNQVNSVLVVAGRSH CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TDQTLDGPGLIDTINRLKDPAKPVRINVLDFGADSDQQTWQTIAQQSGGAYQNVSASNSP CCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCCCH ELAAAIARFIS HHHHHHHHHHC >Mature Secondary Structure GRHSASGSGSPNDPEDNDGWEADSAPGSESGSGSEFDTGSWQRSHRSGGSNWGVSKGLI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH GAVAAVLVVAVSIGLWWYFDRRTSDNQAEAAATCVHGNNAIAVVADPSIADRIGELSERF HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHEEEEECCCEEEEEECCHHHHHHHHHHHHH NQKHEVIGDYCFTVSVRPADSANVIKGLTGQWPAELGEQPALWIPGSSISSARLKAASKT HHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHC NIVSDSRSLVSTPVVIAVTPKLRQAIPNDKSWADVPALQNVPNSLDGVGLPGWGSLRLAL CCCCCCHHHHCCCEEEEECHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEC PSSGNADAAQLAAEAVAAASVRPGDSPELGAGAAGSLAATAPKLPANNVADAIGALLDGG CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC EQPGAAVHAVVTTEQQLYARTRNNGDAKKVIAQWQPAGATPIADYPTVQLDGAWLSEEQH CCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHH TAASQFARFLGDKDQIKDLAAAGFRAEGTDLPTSDVVSFAKIDKPLSIEDKVRVALADGT HHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCC STGSGTTTIMLASSPAPDAKLSDITGPLANRVRALAPGSGIGLWVYDGKEGNTVVRLGGA CCCCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCC GDDVEGMPRSQSVADALTALQPTGNGAVAYTTLRALYQDAVAGFRPNQVNSVLVVAGRSH CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC TDQTLDGPGLIDTINRLKDPAKPVRINVLDFGADSDQQTWQTIAQQSGGAYQNVSASNSP CCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEECCCCCCCH ELAAAIARFIS HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]