| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629279
Identifier: 169629279
GI number: 169629279
Start: 2208531
End: 2208956
Strand: Reverse
Name: 169629279
Synonym: MAB_2193c
Alternate gene names: NA
Gene position: 2208956-2208531 (Counterclockwise)
Preceding gene: 169629284
Following gene: 169629277
Centisome position: 43.59
GC content: 65.96
Gene sequence:
>426_bases ATGCCGAACACCCCTACAACCCGACTTACCGATGATGCGCTGGCGTTCCTGTCCGAGCGCCATCTGGCCATGCTGACCAC GCTGAGGCAAGACAACAGCCCGCATGTGGTGGCTGTCGGCTTCACCTTCGACCCCGCGACCCATATCGCGCGCGTCATCA CCACCGGCGGCTCGCAGAAGGCCGTCAACGCCGAGCGCGGCGGCGTCGCGGTGCTAAGTCAGGTAGACGGCGCCCGCTGG CTCTCCCTGGAGGGTTCGGCCACCGTGGTCACCGACAAGGACGCCGTGCGTGACGCCGAACTGCGTTATGCGCAGCGCTA CCGCACCCCGCGTGTCAACCCGAAGCGGGTGGTCATCGAGGTCAAGATCGAGCGGGTGCTGGGTTCTTCGGATCTGCTGA ACCGGGCCGACAGTCCTAGCGAGTAG
Upstream 100 bases:
>100_bases GTTGACGGTCTTCGCCCAAGCGGCTTATCCCCCAGCTGGCCGGAGTGTCGCACCGTGTCGGTCACGTCAGCGATTATGTC CTGCGCTAGCGTGATGGTTG
Downstream 100 bases:
>100_bases GCACCACCGTCAGGCCGTGGGGCCGCGAATTCACCGATTCGCAACCGTTTTCGGTGATGACGACGATGTCCTCGATCCGC GCACCCCACTGGCCCGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVVAVGFTFDPATHIARVITTGGSQKAVNAERGGVAVLSQVDGARW LSLEGSATVVTDKDAVRDAELRYAQRYRTPRVNPKRVVIEVKIERVLGSSDLLNRADSPSE
Sequences:
>Translated_141_residues MPNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVVAVGFTFDPATHIARVITTGGSQKAVNAERGGVAVLSQVDGARW LSLEGSATVVTDKDAVRDAELRYAQRYRTPRVNPKRVVIEVKIERVLGSSDLLNRADSPSE >Mature_140_residues PNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVVAVGFTFDPATHIARVITTGGSQKAVNAERGGVAVLSQVDGARWL SLEGSATVVTDKDAVRDAELRYAQRYRTPRVNPKRVVIEVKIERVLGSSDLLNRADSPSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019920 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01243 Pyridox_oxidase [H]
EC number: NA
Molecular weight: Translated: 15381; Mature: 15249
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVVAVGFTFDPATHIARVITTGGSQK CCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCCC AVNAERGGVAVLSQVDGARWLSLEGSATVVTDKDAVRDAELRYAQRYRTPRVNPKRVVIE CCCCCCCCEEEEEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE VKIERVLGSSDLLNRADSPSE EEEEHHHCCCHHHHCCCCCCC >Mature Secondary Structure PNTPTTRLTDDALAFLSERHLAMLTTLRQDNSPHVVAVGFTFDPATHIARVITTGGSQK CCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHCCCCCCC AVNAERGGVAVLSQVDGARWLSLEGSATVVTDKDAVRDAELRYAQRYRTPRVNPKRVVIE CCCCCCCCEEEEEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE VKIERVLGSSDLLNRADSPSE EEEEHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]