| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is cobIJ [H]
Identifier: 169629284
GI number: 169629284
Start: 2212509
End: 2214008
Strand: Reverse
Name: cobIJ [H]
Synonym: MAB_2198c
Alternate gene names: 169629284
Gene position: 2214008-2212509 (Counterclockwise)
Preceding gene: 169629285
Following gene: 169629279
Centisome position: 43.69
GC content: 67.93
Gene sequence:
>1500_bases ATGACCGATGCGAACAAACCCCGCGGGGTGCTGTGGGGCGTGGGACTCGGCCCCGGTGATCCCGAGCTGGTGACGGTCAA GGCCGCACGGGTGATCGGCGATGCCGATGTGGTGGCATTTCACAGCGCACGGCATGGTCGCAGCATCGCCCGTTCGATCG CCGAGCCATATCTGCGACCAGGCCAGATCGAGGAGCATCTGGTCTACCCGGTCACCACCGAAACCACCGATCACCCGGGC GGCTACCGCGGCGCGATCGACGACTTCTACGAAGAGTCCGCGAACCGGATTGCCGCACATCTCGATTCCGGACGGAACGT GGCATTGCTGGCCGAGGGCGATCCGCTGTTCTACAGCTCCTATATGCATATGCATCGCCGTCTGACCGACAGATTCGACG CCGTCATCATCCCCGGCGTGACATCGTTCAGCGCCGCCTCGGCCGCCACCGGCACCCCACTGGTGGAGGGGGACGAGATT TTGACCGTGATTCCCGGCACCCTGCCCGCCGACGAGATCACCCGCAGGCTCGGCGATTCCCATGCCGCGGTCATCATGAA ACTGGGCCGGTCCTACGGCGCCGTGCGCCAGGCGTTGGACGCCTCCGGCCTGCTGGATCGCGCGTACTACGTGGAACGGG CCAGTACCCCGGGCCAGCGGGTACTTCCCGCCGCCGAGGTGGACCCCGCCTCGGTGCCGTACTTCTCGCTGGTCCTGGTC CCCGGAGCACAATCGGCAACCGACATCGACACCGACCCGGACGGGATGGTCACGGTCCTCGGCCTGGGCCCGGGGCATCA CGATTGGACCACCACCGAGGTGCGCCAGGAGCTGGCGCGGGCCACCGACCTCATCGGCTACGGCCCGTACCTGGATCGGA TCCCCGCCCGGGACGGCCAAGTTCGGCATGCCAGCGACAACCGCGACGAGCCGGCGCGTGCCGAGTTGGCGTTCAAGCTC GCTGCCGGTGGCCGCCGGGTGGCCGTCGTTTCGTCCGGCGACCCCGGCGTGTTCGCGATGGCCGCGGCGGTACTGGAGGA GGCGAGGGCGTGGCCGGATGTGACGGTCCGGGTACTGCCCGCGATGACGGCCGCACAGGCCGTCGCCAGCCGAGTGGGCG CTCCCCTCGGACACGACTACGCGGTGATCTCGCTATCCGATCGCCTGAAGCCGTGGAAGGTCATCGAGTCTCGGCTACGC GCCGCCGCGGCGGCCGATCTCGTGCTGGCCGTGTATAACCCGGCATCGAAGTCCCGGACCTGGCAGGTGGCATCGATGCG TGACGTGCTGCTGGAACATCGCGATCCGGCGACACCGGTGGTGTTGGGGCGCGATGTCGGCGGCGCGGGGGAATCCGTGC GGGTTACCACCCTGGGCGAGCTCGACCCCACCGTGGTGGACATGCGTACCCTACTGATCATCGGCTCGTCGCAGACCCAA TGGCACGACACCGATTCTGGCCCGCAGGTCTTTACACCCCGGCGTTATCCCGCTCGGTAA
Upstream 100 bases:
>100_bases GCGTGGCATGGAGTATCTGCTGGTGCGGGGGCGGCGCGGCGGCAGCGCGATGGCGGCCGCCGCGGTGAATGCGATTGCGA GCGATAAGGACTAACGGAGC
Downstream 100 bases:
>100_bases CCCATTGCTGCGCCGCATCCACGGTGGACACGGTGGACACGTTCTCCGGCAACGCGGGCCTGTCAATCATCACGACGGGA ATGCCCAGCGCCGCTGCCGC
Product: cobalamin biosynthesis protein CobI
Products: NA
Alternate protein names: Precorrin-2 C(20)-methyltransferase; S-adenosyl-L-methionine--precorrin-2 methyltransferase; SP2MT; Precorrin-3B C17-methyltransferase; S-adenosyl-L-methionine--precorrin-3B methyltransferase [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTDANKPRGVLWGVGLGPGDPELVTVKAARVIGDADVVAFHSARHGRSIARSIAEPYLRPGQIEEHLVYPVTTETTDHPG GYRGAIDDFYEESANRIAAHLDSGRNVALLAEGDPLFYSSYMHMHRRLTDRFDAVIIPGVTSFSAASAATGTPLVEGDEI LTVIPGTLPADEITRRLGDSHAAVIMKLGRSYGAVRQALDASGLLDRAYYVERASTPGQRVLPAAEVDPASVPYFSLVLV PGAQSATDIDTDPDGMVTVLGLGPGHHDWTTTEVRQELARATDLIGYGPYLDRIPARDGQVRHASDNRDEPARAELAFKL AAGGRRVAVVSSGDPGVFAMAAAVLEEARAWPDVTVRVLPAMTAAQAVASRVGAPLGHDYAVISLSDRLKPWKVIESRLR AAAAADLVLAVYNPASKSRTWQVASMRDVLLEHRDPATPVVLGRDVGGAGESVRVTTLGELDPTVVDMRTLLIIGSSQTQ WHDTDSGPQVFTPRRYPAR
Sequences:
>Translated_499_residues MTDANKPRGVLWGVGLGPGDPELVTVKAARVIGDADVVAFHSARHGRSIARSIAEPYLRPGQIEEHLVYPVTTETTDHPG GYRGAIDDFYEESANRIAAHLDSGRNVALLAEGDPLFYSSYMHMHRRLTDRFDAVIIPGVTSFSAASAATGTPLVEGDEI LTVIPGTLPADEITRRLGDSHAAVIMKLGRSYGAVRQALDASGLLDRAYYVERASTPGQRVLPAAEVDPASVPYFSLVLV PGAQSATDIDTDPDGMVTVLGLGPGHHDWTTTEVRQELARATDLIGYGPYLDRIPARDGQVRHASDNRDEPARAELAFKL AAGGRRVAVVSSGDPGVFAMAAAVLEEARAWPDVTVRVLPAMTAAQAVASRVGAPLGHDYAVISLSDRLKPWKVIESRLR AAAAADLVLAVYNPASKSRTWQVASMRDVLLEHRDPATPVVLGRDVGGAGESVRVTTLGELDPTVVDMRTLLIIGSSQTQ WHDTDSGPQVFTPRRYPAR >Mature_498_residues TDANKPRGVLWGVGLGPGDPELVTVKAARVIGDADVVAFHSARHGRSIARSIAEPYLRPGQIEEHLVYPVTTETTDHPGG YRGAIDDFYEESANRIAAHLDSGRNVALLAEGDPLFYSSYMHMHRRLTDRFDAVIIPGVTSFSAASAATGTPLVEGDEIL TVIPGTLPADEITRRLGDSHAAVIMKLGRSYGAVRQALDASGLLDRAYYVERASTPGQRVLPAAEVDPASVPYFSLVLVP GAQSATDIDTDPDGMVTVLGLGPGHHDWTTTEVRQELARATDLIGYGPYLDRIPARDGQVRHASDNRDEPARAELAFKLA AGGRRVAVVSSGDPGVFAMAAAVLEEARAWPDVTVRVLPAMTAAQAVASRVGAPLGHDYAVISLSDRLKPWKVIESRLRA AAAADLVLAVYNPASKSRTWQVASMRDVLLEHRDPATPVVLGRDVGGAGESVRVTTLGELDPTVVDMRTLLIIGSSQTQW HDTDSGPQVFTPRRYPAR
Specific function: Methylates precorrin-2 at the C-20 position to produce precorrin-3A [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR006364 - InterPro: IPR006363 - InterPro: IPR003043 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.130; =2.1.1.131 [H]
Molecular weight: Translated: 53414; Mature: 53283
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00839 SUMT_1 ; PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDANKPRGVLWGVGLGPGDPELVTVKAARVIGDADVVAFHSARHGRSIARSIAEPYLRP CCCCCCCCEEEEECCCCCCCCCEEEEEEHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCC GQIEEHLVYPVTTETTDHPGGYRGAIDDFYEESANRIAAHLDSGRNVALLAEGDPLFYSS CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH YMHMHRRLTDRFDAVIIPGVTSFSAASAATGTPLVEGDEILTVIPGTLPADEITRRLGDS HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCC HAAVIMKLGRSYGAVRQALDASGLLDRAYYVERASTPGQRVLPAAEVDPASVPYFSLVLV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE PGAQSATDIDTDPDGMVTVLGLGPGHHDWTTTEVRQELARATDLIGYGPYLDRIPARDGQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC VRHASDNRDEPARAELAFKLAAGGRRVAVVSSGDPGVFAMAAAVLEEARAWPDVTVRVLP EEECCCCCCCCCHHHEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHH AMTAAQAVASRVGAPLGHDYAVISLSDRLKPWKVIESRLRAAAAADLVLAVYNPASKSRT HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCE WQVASMRDVLLEHRDPATPVVLGRDVGGAGESVRVTTLGELDPTVVDMRTLLIIGSSQTQ EEHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHCCEEEEEEECCCCCC WHDTDSGPQVFTPRRYPAR CCCCCCCCCEECCCCCCCC >Mature Secondary Structure TDANKPRGVLWGVGLGPGDPELVTVKAARVIGDADVVAFHSARHGRSIARSIAEPYLRP CCCCCCCEEEEECCCCCCCCCEEEEEEHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCC GQIEEHLVYPVTTETTDHPGGYRGAIDDFYEESANRIAAHLDSGRNVALLAEGDPLFYSS CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH YMHMHRRLTDRFDAVIIPGVTSFSAASAATGTPLVEGDEILTVIPGTLPADEITRRLGDS HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCC HAAVIMKLGRSYGAVRQALDASGLLDRAYYVERASTPGQRVLPAAEVDPASVPYFSLVLV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE PGAQSATDIDTDPDGMVTVLGLGPGHHDWTTTEVRQELARATDLIGYGPYLDRIPARDGQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC VRHASDNRDEPARAELAFKLAAGGRRVAVVSSGDPGVFAMAAAVLEEARAWPDVTVRVLP EEECCCCCCCCCHHHEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEHH AMTAAQAVASRVGAPLGHDYAVISLSDRLKPWKVIESRLRAAAAADLVLAVYNPASKSRT HHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCE WQVASMRDVLLEHRDPATPVVLGRDVGGAGESVRVTTLGELDPTVVDMRTLLIIGSSQTQ EEHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCHHCCEEEEEEECCCCCC WHDTDSGPQVFTPRRYPAR CCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]