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The map label for this gene is 169627385

Identifier: 169627385

GI number: 169627385

Start: 279324

End: 280244

Strand: Direct

Name: 169627385

Synonym: MAB_0280

Alternate gene names: NA

Gene position: 279324-280244 (Clockwise)

Preceding gene: 169627381

Following gene: 169627386

Centisome position: 5.51

GC content: 63.19

Gene sequence:

>921_bases
ATGCCCACGCCCGCCGAGGAACTGGATGTCGACGGTATCGCCGTCCGGCTGAGTAACCCTGACAAGGTGTATTTCCCCCG
GTTGGGAGCCGACGGTGGCACCAAGCGGCACCTTGCGGAGTACTACCGCACCGTCGCTGTCGGTCCGATGCTGCACGCAT
TACGGGACCGGCCCGCCCATCTGCAGCGCTTTCCCGACGGCATCGACGGCGAAGAGATCTATCAAAAACGGCTGCCGAAG
CACTATCCCGATTATCTGGACAGCTGCGAAGTGACCTTTCCCTCGGGTCGTACCGCCGAGGTGCTGCGGGTGACCAAGCC
GGCCGCCATCGTGTGGGCGGCACAGATGGGCACCGTGACATTGCATCCCTGGCAGGTCCGCTATCCCGATCTGGATCACC
CCGACGAACTGCGCATTGATTTGGATCCGCAACCCGGAACCGGATTCGAGGAGGCCAAGGTGGTCGCGCTCGAGGTGTTG
CGCCCGTTGCTCGAGGAGCTGGGACTGGTCGCCTACCCGAAGACTTCCGGTGGTCGCGGTATCCACGTGTATCTGCGTAT
CGCGGCTCGTTGGGACTTCATCGAGGTGCGAAGGGCCGGCATCGCGCTGGCCCGAGAGGTGGAACGTCGTGCGCCCAAGC
AGGTGACGACATCATGGTGGAAGGAAGAGCGGGGCGAGCGTATCTTCATCGACTTCAACCAGAATGCGCGCGATCGCACC
ATGGCATCGGCATATTCGGTGCGCCGCACGCCCATCGCTACCGTTTCCACACCGGTGACGTGGGAAGAGCTCGTCGACGC
CGAACCTGATGATTTCACCATCGCGACCGTGCCGGCACTGCTGCGGAAACGGCCCGACCCCATGGCGGGTATGGACGACG
CCCCGCAATCGATCGAGCCGCTGCTGGAGATGGTAGAATAG

Upstream 100 bases:

>100_bases
GTTCGTAGGAGGCGCCGTCAGGGATTTTTGCGACAGGTTTGGCAAGCATTGGCGCGATTGGAGGCATGACGGGCAGGTCC
ATTCCCATATGATGACGGTA

Downstream 100 bases:

>100_bases
GACGAGGTGAACGGGCTGGGCGATATGCCCTATCCGCCGAACTACCCGAAGATGCCGGGAGAACCGAAACGCGTTCAGCC
TTCCCGGGATACCGATAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPTPAEELDVDGIAVRLSNPDKVYFPRLGADGGTKRHLAEYYRTVAVGPMLHALRDRPAHLQRFPDGIDGEEIYQKRLPK
HYPDYLDSCEVTFPSGRTAEVLRVTKPAAIVWAAQMGTVTLHPWQVRYPDLDHPDELRIDLDPQPGTGFEEAKVVALEVL
RPLLEELGLVAYPKTSGGRGIHVYLRIAARWDFIEVRRAGIALAREVERRAPKQVTTSWWKEERGERIFIDFNQNARDRT
MASAYSVRRTPIATVSTPVTWEELVDAEPDDFTIATVPALLRKRPDPMAGMDDAPQSIEPLLEMVE

Sequences:

>Translated_306_residues
MPTPAEELDVDGIAVRLSNPDKVYFPRLGADGGTKRHLAEYYRTVAVGPMLHALRDRPAHLQRFPDGIDGEEIYQKRLPK
HYPDYLDSCEVTFPSGRTAEVLRVTKPAAIVWAAQMGTVTLHPWQVRYPDLDHPDELRIDLDPQPGTGFEEAKVVALEVL
RPLLEELGLVAYPKTSGGRGIHVYLRIAARWDFIEVRRAGIALAREVERRAPKQVTTSWWKEERGERIFIDFNQNARDRT
MASAYSVRRTPIATVSTPVTWEELVDAEPDDFTIATVPALLRKRPDPMAGMDDAPQSIEPLLEMVE
>Mature_305_residues
PTPAEELDVDGIAVRLSNPDKVYFPRLGADGGTKRHLAEYYRTVAVGPMLHALRDRPAHLQRFPDGIDGEEIYQKRLPKH
YPDYLDSCEVTFPSGRTAEVLRVTKPAAIVWAAQMGTVTLHPWQVRYPDLDHPDELRIDLDPQPGTGFEEAKVVALEVLR
PLLEELGLVAYPKTSGGRGIHVYLRIAARWDFIEVRRAGIALAREVERRAPKQVTTSWWKEERGERIFIDFNQNARDRTM
ASAYSVRRTPIATVSTPVTWEELVDAEPDDFTIATVPALLRKRPDPMAGMDDAPQSIEPLLEMVE

Specific function: Unknown

COG id: COG3285

COG function: function code L; Predicted eukaryotic-type DNA primase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 34584; Mature: 34453

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPAEELDVDGIAVRLSNPDKVYFPRLGADGGTKRHLAEYYRTVAVGPMLHALRDRPAH
CCCCHHHCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQRFPDGIDGEEIYQKRLPKHYPDYLDSCEVTFPSGRTAEVLRVTKPAAIVWAAQMGTVT
HHHCCCCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCEEEEEECCCEEEEEEECCCEEE
LHPWQVRYPDLDHPDELRIDLDPQPGTGFEEAKVVALEVLRPLLEELGLVAYPKTSGGRG
ECCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCE
IHVYLRIAARWDFIEVRRAGIALAREVERRAPKQVTTSWWKEERGERIFIDFNQNARDRT
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCHHH
MASAYSVRRTPIATVSTPVTWEELVDAEPDDFTIATVPALLRKRPDPMAGMDDAPQSIEP
HHHHHHHHCCCCEEECCCCCHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCCHHHHHH
LLEMVE
HHHHHC
>Mature Secondary Structure 
PTPAEELDVDGIAVRLSNPDKVYFPRLGADGGTKRHLAEYYRTVAVGPMLHALRDRPAH
CCCHHHCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQRFPDGIDGEEIYQKRLPKHYPDYLDSCEVTFPSGRTAEVLRVTKPAAIVWAAQMGTVT
HHHCCCCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCEEEEEECCCEEEEEEECCCEEE
LHPWQVRYPDLDHPDELRIDLDPQPGTGFEEAKVVALEVLRPLLEELGLVAYPKTSGGRG
ECCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCE
IHVYLRIAARWDFIEVRRAGIALAREVERRAPKQVTTSWWKEERGERIFIDFNQNARDRT
EEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCHHH
MASAYSVRRTPIATVSTPVTWEELVDAEPDDFTIATVPALLRKRPDPMAGMDDAPQSIEP
HHHHHHHHCCCCEEECCCCCHHHHHCCCCCCEEEEHHHHHHHCCCCCCCCCCCCHHHHHH
LLEMVE
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]