Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167626113

Identifier: 167626113

GI number: 167626113

Start: 5111765

End: 5112832

Strand: Reverse

Name: 167626113

Synonym: Shal_4208

Alternate gene names: NA

Gene position: 5112832-5111765 (Counterclockwise)

Preceding gene: 167626114

Following gene: 167626112

Centisome position: 97.82

GC content: 44.01

Gene sequence:

>1068_bases
GTGAGTGCAAACAACAAACGTTATTTACTGTATATAGCGCAGAATTATTCATATGCAATGTTACGGCCGTTGCAAGCTGC
AATTTGGGCTAGAGGCGATGAGGCTCGATGGTTTCTAGAGGGGAACGAGGTCGATCCAGCCTTCTTGAATGCAGCAGAGA
AGCGATTGTTAACCATTGAAGAGGTTAAATCTTGGCAGCCTGATGCGGTATTCGTTCCTGGTAATGTGGTGCCGCGCTTT
ATTCCCGGAATTAAGGTCGGTGTATTTCATGGCTTTAACGCAGGCAAGATGAACCATAGAGGTCGTGAAGATCACTTTGA
AATCCGTGATTGTTTTGATCTGTACTGTACTCAGGGCCCTGCAACAACACTGCCTTTTGAGCGGCTTGCTGAAAAGTTTG
GTACTTTTAAAGTTGCTGAAACAGGCTGGCCGACACTGGATCCTATGTTTCAACAAGGCTTAGAGCGACCTTACGATATT
GAGGGGGACGATAGGCCTGTAGTCCTGTTCTGTTCAACATTTTCTCGTAGTTTATCTTGTGCTCCGGTAGTTTATGAAAA
AATTAAGGCGCTATCCGAGCAAGGAAACTGGCGTTGGTTGGTACAGTTCCATCCTAAGATGAGCCAAGATATAGTGGATA
AATATAAGGCGCTTGAAAGCGAGAACCTGACGTTTATTGAAACGGATAATGTCTTACCGCTACTAAAAGCTGCAGATGTA
ATGCTATGCGACACCTCATCGATTTTGATTATGTTCTTGCTGCAGGGTAAACCGGTAGTGACTTTTAACAACCAGACCAA
TCGCTCGCACCTAGTTAATGTTGAAGCGCTTGAAGATATTGAGCCTGCATTAGAGAAAGTGTTGAGTCATCCACCAGAGC
TGATGGCCGAAATTGAGCATTATTGTGATGATATCCACCCATTTCGAGATGGTCAGTCGAGTGAGCGTGTTCTCGCCGCG
ACTGACAAGCTGATTGAAAATGGTATTGACGATCTAAAACCTAAGCCGATGAATTTATTGCGTCATCTTAAGATGCGTAA
AAAGCTGGGTTATTGGAAATTTAATTAG

Upstream 100 bases:

>100_bases
CAGAAGTCGATATTTTAGCAAAAGTACAAGCAGCACGGATTGCTCAAGAGTATTTGGCATTGGTTAAATAAACATTGAAG
AGTTTGTGAGGGAAATTGTT

Downstream 100 bases:

>100_bases
TATCAAACGGTTTGAAGTTCTTAGATTGGTGCTTTGTAATCAGTTGCATCAATCGAGGGCTGGAGAGTTAGTAAGTGAAA
GTTTTTGTTATTAGTTTAAA

Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSANNKRYLLYIAQNYSYAMLRPLQAAIWARGDEARWFLEGNEVDPAFLNAAEKRLLTIEEVKSWQPDAVFVPGNVVPRF
IPGIKVGVFHGFNAGKMNHRGREDHFEIRDCFDLYCTQGPATTLPFERLAEKFGTFKVAETGWPTLDPMFQQGLERPYDI
EGDDRPVVLFCSTFSRSLSCAPVVYEKIKALSEQGNWRWLVQFHPKMSQDIVDKYKALESENLTFIETDNVLPLLKAADV
MLCDTSSILIMFLLQGKPVVTFNNQTNRSHLVNVEALEDIEPALEKVLSHPPELMAEIEHYCDDIHPFRDGQSSERVLAA
TDKLIENGIDDLKPKPMNLLRHLKMRKKLGYWKFN

Sequences:

>Translated_355_residues
MSANNKRYLLYIAQNYSYAMLRPLQAAIWARGDEARWFLEGNEVDPAFLNAAEKRLLTIEEVKSWQPDAVFVPGNVVPRF
IPGIKVGVFHGFNAGKMNHRGREDHFEIRDCFDLYCTQGPATTLPFERLAEKFGTFKVAETGWPTLDPMFQQGLERPYDI
EGDDRPVVLFCSTFSRSLSCAPVVYEKIKALSEQGNWRWLVQFHPKMSQDIVDKYKALESENLTFIETDNVLPLLKAADV
MLCDTSSILIMFLLQGKPVVTFNNQTNRSHLVNVEALEDIEPALEKVLSHPPELMAEIEHYCDDIHPFRDGQSSERVLAA
TDKLIENGIDDLKPKPMNLLRHLKMRKKLGYWKFN
>Mature_354_residues
SANNKRYLLYIAQNYSYAMLRPLQAAIWARGDEARWFLEGNEVDPAFLNAAEKRLLTIEEVKSWQPDAVFVPGNVVPRFI
PGIKVGVFHGFNAGKMNHRGREDHFEIRDCFDLYCTQGPATTLPFERLAEKFGTFKVAETGWPTLDPMFQQGLERPYDIE
GDDRPVVLFCSTFSRSLSCAPVVYEKIKALSEQGNWRWLVQFHPKMSQDIVDKYKALESENLTFIETDNVLPLLKAADVM
LCDTSSILIMFLLQGKPVVTFNNQTNRSHLVNVEALEDIEPALEKVLSHPPELMAEIEHYCDDIHPFRDGQSSERVLAAT
DKLIENGIDDLKPKPMNLLRHLKMRKKLGYWKFN

Specific function: Unknown

COG id: COG1887

COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40712; Mature: 40581

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANNKRYLLYIAQNYSYAMLRPLQAAIWARGDEARWFLEGNEVDPAFLNAAEKRLLTIE
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHEEHH
EVKSWQPDAVFVPGNVVPRFIPGIKVGVFHGFNAGKMNHRGREDHFEIRDCFDLYCTQGP
HHHCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
ATTLPFERLAEKFGTFKVAETGWPTLDPMFQQGLERPYDIEGDDRPVVLFCSTFSRSLSC
CCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
APVVYEKIKALSEQGNWRWLVQFHPKMSQDIVDKYKALESENLTFIETDNVLPLLKAADV
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCE
MLCDTSSILIMFLLQGKPVVTFNNQTNRSHLVNVEALEDIEPALEKVLSHPPELMAEIEH
EEECCHHHHHHHEECCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
YCDDIHPFRDGQSSERVLAATDKLIENGIDDLKPKPMNLLRHLKMRKKLGYWKFN
HHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SANNKRYLLYIAQNYSYAMLRPLQAAIWARGDEARWFLEGNEVDPAFLNAAEKRLLTIE
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHEEHH
EVKSWQPDAVFVPGNVVPRFIPGIKVGVFHGFNAGKMNHRGREDHFEIRDCFDLYCTQGP
HHHCCCCCEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
ATTLPFERLAEKFGTFKVAETGWPTLDPMFQQGLERPYDIEGDDRPVVLFCSTFSRSLSC
CCCCCHHHHHHHHCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
APVVYEKIKALSEQGNWRWLVQFHPKMSQDIVDKYKALESENLTFIETDNVLPLLKAADV
HHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCE
MLCDTSSILIMFLLQGKPVVTFNNQTNRSHLVNVEALEDIEPALEKVLSHPPELMAEIEH
EEECCHHHHHHHEECCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
YCDDIHPFRDGQSSERVLAATDKLIENGIDDLKPKPMNLLRHLKMRKKLGYWKFN
HHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA