Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is yeaZ [H]
Identifier: 167623757
GI number: 167623757
Start: 2185310
End: 2186026
Strand: Direct
Name: yeaZ [H]
Synonym: Shal_1827
Alternate gene names: 167623757
Gene position: 2185310-2186026 (Clockwise)
Preceding gene: 167623755
Following gene: 167623758
Centisome position: 41.81
GC content: 45.61
Gene sequence:
>717_bases ATGACAGATAAATCTAATGAAACGATGCAGTTGAGCATTTTAGCGCTCGATACCTGTACTGAGTCGTGTTCAGCAGCGGT TAGCCATCAAGGTGCAACGTACAGCGAACAAGCAGATGCACCGCGTGAACATAGTCAACGTTTGTTACCTATGGTTAAGT CGGTTTTGTCTGAAGCGAACTTAGCACTGCAAGATGTCGACGTGATTGCTTATGGCAGAGGCCCTGGCAGTTTTACTGGC ATTCGTATTTGTACCAGTATTACTCAAGGTTTGGCGCTTGGCCAAGAGTTGCCAGTTATTGGTATTTCAACATTAGCGGC TATGGCTCAATCGGCAATTGAAGAAGGAGCCTGCCAAGTTCTAGCTGCTATTGATGCACGAATGGGAGAAGTTTACTGGG GCCAATACATTGCAGTCGATGGCTTAGCGACGTTAGTGAACGAAGAAGTCGTCAGTGCACCTGAGGCTATAGTGCTAAGC TTAGATTTAACTTTGCCTGTTGTTGCTTGTGGTACTGGCTTTGATGCTTACCCACAAATACTCGAACAGGCACCGAATAT GAGTATTTGTGAAAAAGCCAAGTTCCCTGAAGCTAAATATATGCTAGCGCTTGCTCGTGATGGTGTCAGTAAGGGGCACA GTACTACAGTTGATGAGTTAACTCCGGTTTATCTTCGTGATACAGTGACTTGGCAAAAACTGCCGGGTAGAGAGTAA
Upstream 100 bases:
>100_bases TCATCACGTCCTAGGTGAGCCTTGAGTTTTAACGTTTATTGAGATGTGATAGATGTTAACCGATTTAAATCGCATAAATA ATAAGTTTGGTAAGTAATTC
Downstream 100 bases:
>100_bases TCTTAAAACGCGAGCCCTGTATATTAGCGAACTAGAATTTTTGTTCTATATTGAGATTGACGCTAAAGCAGGTACATTAA GGACGATTTGATGCAGATTA
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTG IRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLS LDLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE
Sequences:
>Translated_238_residues MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTG IRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLS LDLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE >Mature_237_residues TDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTGI RICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSL DLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=231, Percent_Identity=45.021645021645, Blast_Score=193, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25337; Mature: 25206
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEAN CCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCC LALQDVDVIAYGRGPGSFTGIRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQV CCCEECEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSLDLTLPVVACGTGFDAYPQI HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHH LEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE HHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCEEHCCCCCCCCCCCCC >Mature Secondary Structure TDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEAN CCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCC LALQDVDVIAYGRGPGSFTGIRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQV CCCEECEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSLDLTLPVVACGTGFDAYPQI HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHH LEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE HHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCEEHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]