Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yeaZ [H]

Identifier: 167623757

GI number: 167623757

Start: 2185310

End: 2186026

Strand: Direct

Name: yeaZ [H]

Synonym: Shal_1827

Alternate gene names: 167623757

Gene position: 2185310-2186026 (Clockwise)

Preceding gene: 167623755

Following gene: 167623758

Centisome position: 41.81

GC content: 45.61

Gene sequence:

>717_bases
ATGACAGATAAATCTAATGAAACGATGCAGTTGAGCATTTTAGCGCTCGATACCTGTACTGAGTCGTGTTCAGCAGCGGT
TAGCCATCAAGGTGCAACGTACAGCGAACAAGCAGATGCACCGCGTGAACATAGTCAACGTTTGTTACCTATGGTTAAGT
CGGTTTTGTCTGAAGCGAACTTAGCACTGCAAGATGTCGACGTGATTGCTTATGGCAGAGGCCCTGGCAGTTTTACTGGC
ATTCGTATTTGTACCAGTATTACTCAAGGTTTGGCGCTTGGCCAAGAGTTGCCAGTTATTGGTATTTCAACATTAGCGGC
TATGGCTCAATCGGCAATTGAAGAAGGAGCCTGCCAAGTTCTAGCTGCTATTGATGCACGAATGGGAGAAGTTTACTGGG
GCCAATACATTGCAGTCGATGGCTTAGCGACGTTAGTGAACGAAGAAGTCGTCAGTGCACCTGAGGCTATAGTGCTAAGC
TTAGATTTAACTTTGCCTGTTGTTGCTTGTGGTACTGGCTTTGATGCTTACCCACAAATACTCGAACAGGCACCGAATAT
GAGTATTTGTGAAAAAGCCAAGTTCCCTGAAGCTAAATATATGCTAGCGCTTGCTCGTGATGGTGTCAGTAAGGGGCACA
GTACTACAGTTGATGAGTTAACTCCGGTTTATCTTCGTGATACAGTGACTTGGCAAAAACTGCCGGGTAGAGAGTAA

Upstream 100 bases:

>100_bases
TCATCACGTCCTAGGTGAGCCTTGAGTTTTAACGTTTATTGAGATGTGATAGATGTTAACCGATTTAAATCGCATAAATA
ATAAGTTTGGTAAGTAATTC

Downstream 100 bases:

>100_bases
TCTTAAAACGCGAGCCCTGTATATTAGCGAACTAGAATTTTTGTTCTATATTGAGATTGACGCTAAAGCAGGTACATTAA
GGACGATTTGATGCAGATTA

Product: peptidase M22 glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTG
IRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLS
LDLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE

Sequences:

>Translated_238_residues
MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTG
IRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLS
LDLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE
>Mature_237_residues
TDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEANLALQDVDVIAYGRGPGSFTGI
RICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQVLAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSL
DLTLPVVACGTGFDAYPQILEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=231, Percent_Identity=45.021645021645, Blast_Score=193, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25337; Mature: 25206

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEAN
CCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCC
LALQDVDVIAYGRGPGSFTGIRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQV
CCCEECEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSLDLTLPVVACGTGFDAYPQI
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHH
LEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE
HHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCEEHCCCCCCCCCCCCC
>Mature Secondary Structure 
TDKSNETMQLSILALDTCTESCSAAVSHQGATYSEQADAPREHSQRLLPMVKSVLSEAN
CCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCC
LALQDVDVIAYGRGPGSFTGIRICTSITQGLALGQELPVIGISTLAAMAQSAIEEGACQV
CCCEECEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAAIDARMGEVYWGQYIAVDGLATLVNEEVVSAPEAIVLSLDLTLPVVACGTGFDAYPQI
HHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHHH
LEQAPNMSICEKAKFPEAKYMLALARDGVSKGHSTTVDELTPVYLRDTVTWQKLPGRE
HHHCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCEEHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]