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The map label for this gene is yoaA [H]

Identifier: 167623755

GI number: 167623755

Start: 2182232

End: 2184157

Strand: Direct

Name: yoaA [H]

Synonym: Shal_1825

Alternate gene names: 167623755

Gene position: 2182232-2184157 (Clockwise)

Preceding gene: 167623745

Following gene: 167623757

Centisome position: 41.75

GC content: 44.29

Gene sequence:

>1926_bases
TTGACCAGTAAACTAACACAGCAAGTCGCGGCTGCATTTTCAAACGATGGTGTATTGGCACAGTCAATTAAAGGTTATAG
CTGCCGTGATGTGCAGGTCACTATGGCCAAAGCGGTGACTGAATCTATCAGTAGTTGCAATAACTTGGTGGTAGAGGCCG
GGACTGGTGTGGGCAAGACCTTTGCTTATCTTATTCCAGCTTTATTGAGTGGCAAGCAGGTGATTGTTAGTACAGGCAGT
AAGAACTTACAAGAGCAGCTATTTTACAAAGATCTCCCTGCATTATTATCCATGCTTGAGCTCACTCCTAAGGTTGCGCT
ACTCAAGGGCCGTAATAACTATCTGTGCCAACATCTAATGGCAAAAGAGCTATCGGGTGCCAGCTCGATGGATCCTCAAG
TGTTAGATGACTTACTGCGCATAAACCAATGGGCAGGGCAGACCACTGACGGTGATATTGGTGGATTAACCTCGGTTACG
GAGAGTTCTCAGGCTTTACCTCTGATAGTCAGCGCCAAAGAAACCTGCATTGGTCAACGCTGTGATCACTATGATGACTG
TTTCACCCGTAAAGCCCGTAATCGAGCGATGGATGCACGCGTCATTGTGGTTAATCACCACCTTTTTTTAGCCGATCGAA
TTTTAAAAGAGACCGGCTTTGCCGAGTTACTACCTGATTCTGATGTGGTTATTTTTGATGAAGCGCATCTATTGCCTGAT
ATCGCCGTCACTTATTTTGGCCAGCAGTGCTCTACACGGCAACTCTCTGATTTATTTGATAAGTTGATTGAGATTTATCG
GCTCGAACTTAGAGATGCTAAACAGATAGAGCTGTTAAGTGCCCGATGCGCTGCAATGTTAAATGAGTGGCATCAAATGC
TATTTAATATTGGTGATACTGACTGGCGCCGTTTATTGGCCAACAAAGCGTTATCAGTACTTTCATGGGGCCTGCTCAAA
GAGATTAAAGTATTACAACAGTTATTATTAGGCCATGTTGGTCGTAGCGATAATTTAGATGATGAGATAGAAAAATTGCA
GGTGCTCGCTAATAAATTAGAGCTATTTTTCTTATGTGAGAACAATCAAGCTGCTTATAGTATCGACTACGGCCACCGCT
ATTTGGTGCTGCGCATTGCGCCAATCGATGTTGCAAAAGAGTGCCGTAAATTGTTTGAGTCTAACCTTGCTTGGATATTT
ACCTCGGCAACGTTACAAATTAATCGCGACTTAAGCCTATTCACTCGTCAGCTTGGCCTAGGCAAGTGCCAAGAAATATT
GCTAGAAAGCCCTTTTGACTACCAGAACAATGCGCTTTTTTGCGTGCCAAGACATCTAGCGAGTGTCAATAATCATCATG
TGGCATTAAACCAGTTTGTCGATGTTTGCGTTAAAGCCATTAATGCCGCTAAAGGTCGAACCTTTATATTATTCACTAGC
CATAGAATGTTGAATTTGGTGGCGCCAGCACTTCAACGCCGAGTCTCTTACCCGCTACTTGTGCAAGGGCAGGCTAATAA
ACAGAGCTTATTAAAAAAGTACCGCCAACTTGGTAATGCTGTGCTACTAGGAACGGGGGCCTTTTGGGAGGGAGTAGATG
TTCGTGGGCGTTTATTAAGCTGTGTGATTATCGATAAACTGCCTTTTGTCTCGCCCGATGACAATCTGTTTCGTGCTCGC
AGCGAAAGCATTGAGCGTGAGGGCAAAGATGCATTTAGCGAGATCTCACTGCCGCAAGCGGTGATCACTCTAAATCAGGG
CGTAGGGCGTTTGATCCGAGATGAAAAAGATAAAGGCGTACTCATTTTATGCGACAACCGTATCGTCAATAAGCCCTACG
GACAGGCATTTTTAAATTCATTACCGCCAATGTCTCGTACTCGTGATTTAGACAAGGCGACAGACTTCTTAGCAAAGATT
AAGTAG

Upstream 100 bases:

>100_bases
CATTTTTATACCCAAAAAGAATTTGAAGATGCTAATTGGGCCTTTATCTTGAAGTCATTTGGCTATATCACTAACACATT
GATTAAAGGTTTAATCACTC

Downstream 100 bases:

>100_bases
CGCAGATTAAGTGATGAATAAAATAATAAAATAAATGCTGGTAAGTAAGATCAACGCTAATAAGCAGCGGCGTCTGTAGA
GTAAGCCCTTATCGTTAAGT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MTSKLTQQVAAAFSNDGVLAQSIKGYSCRDVQVTMAKAVTESISSCNNLVVEAGTGVGKTFAYLIPALLSGKQVIVSTGS
KNLQEQLFYKDLPALLSMLELTPKVALLKGRNNYLCQHLMAKELSGASSMDPQVLDDLLRINQWAGQTTDGDIGGLTSVT
ESSQALPLIVSAKETCIGQRCDHYDDCFTRKARNRAMDARVIVVNHHLFLADRILKETGFAELLPDSDVVIFDEAHLLPD
IAVTYFGQQCSTRQLSDLFDKLIEIYRLELRDAKQIELLSARCAAMLNEWHQMLFNIGDTDWRRLLANKALSVLSWGLLK
EIKVLQQLLLGHVGRSDNLDDEIEKLQVLANKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESNLAWIF
TSATLQINRDLSLFTRQLGLGKCQEILLESPFDYQNNALFCVPRHLASVNNHHVALNQFVDVCVKAINAAKGRTFILFTS
HRMLNLVAPALQRRVSYPLLVQGQANKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFVSPDDNLFRAR
SESIEREGKDAFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATDFLAKI
K

Sequences:

>Translated_641_residues
MTSKLTQQVAAAFSNDGVLAQSIKGYSCRDVQVTMAKAVTESISSCNNLVVEAGTGVGKTFAYLIPALLSGKQVIVSTGS
KNLQEQLFYKDLPALLSMLELTPKVALLKGRNNYLCQHLMAKELSGASSMDPQVLDDLLRINQWAGQTTDGDIGGLTSVT
ESSQALPLIVSAKETCIGQRCDHYDDCFTRKARNRAMDARVIVVNHHLFLADRILKETGFAELLPDSDVVIFDEAHLLPD
IAVTYFGQQCSTRQLSDLFDKLIEIYRLELRDAKQIELLSARCAAMLNEWHQMLFNIGDTDWRRLLANKALSVLSWGLLK
EIKVLQQLLLGHVGRSDNLDDEIEKLQVLANKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESNLAWIF
TSATLQINRDLSLFTRQLGLGKCQEILLESPFDYQNNALFCVPRHLASVNNHHVALNQFVDVCVKAINAAKGRTFILFTS
HRMLNLVAPALQRRVSYPLLVQGQANKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFVSPDDNLFRAR
SESIEREGKDAFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATDFLAKI
K
>Mature_640_residues
TSKLTQQVAAAFSNDGVLAQSIKGYSCRDVQVTMAKAVTESISSCNNLVVEAGTGVGKTFAYLIPALLSGKQVIVSTGSK
NLQEQLFYKDLPALLSMLELTPKVALLKGRNNYLCQHLMAKELSGASSMDPQVLDDLLRINQWAGQTTDGDIGGLTSVTE
SSQALPLIVSAKETCIGQRCDHYDDCFTRKARNRAMDARVIVVNHHLFLADRILKETGFAELLPDSDVVIFDEAHLLPDI
AVTYFGQQCSTRQLSDLFDKLIEIYRLELRDAKQIELLSARCAAMLNEWHQMLFNIGDTDWRRLLANKALSVLSWGLLKE
IKVLQQLLLGHVGRSDNLDDEIEKLQVLANKLELFFLCENNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESNLAWIFT
SATLQINRDLSLFTRQLGLGKCQEILLESPFDYQNNALFCVPRHLASVNNHHVALNQFVDVCVKAINAAKGRTFILFTSH
RMLNLVAPALQRRVSYPLLVQGQANKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLSCVIIDKLPFVSPDDNLFRARS
ESIEREGKDAFSEISLPQAVITLNQGVGRLIRDEKDKGVLILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATDFLAKIK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=630, Percent_Identity=47.1428571428571, Blast_Score=556, Evalue=1e-159,
Organism=Escherichia coli, GI1787018, Length=710, Percent_Identity=27.3239436619718, Blast_Score=152, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 71603; Mature: 71471

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKLTQQVAAAFSNDGVLAQSIKGYSCRDVQVTMAKAVTESISSCNNLVVEAGTGVGKT
CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHH
FAYLIPALLSGKQVIVSTGSKNLQEQLFYKDLPALLSMLELTPKVALLKGRNNYLCQHLM
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
AKELSGASSMDPQVLDDLLRINQWAGQTTDGDIGGLTSVTESSQALPLIVSAKETCIGQR
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHC
CDHYDDCFTRKARNRAMDARVIVVNHHLFLADRILKETGFAELLPDSDVVIFDEAHLLPD
CCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHCHH
IAVTYFGQQCSTRQLSDLFDKLIEIYRLELRDAKQIELLSARCAAMLNEWHQMLFNIGDT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
DWRRLLANKALSVLSWGLLKEIKVLQQLLLGHVGRSDNLDDEIEKLQVLANKLELFFLCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEC
NNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESNLAWIFTSATLQINRDLSLFTRQLGL
CCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHCH
GKCQEILLESPFDYQNNALFCVPRHLASVNNHHVALNQFVDVCVKAINAAKGRTFILFTS
HHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEC
HRMLNLVAPALQRRVSYPLLVQGQANKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLS
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
CVIIDKLPFVSPDDNLFRARSESIEREGKDAFSEISLPQAVITLNQGVGRLIRDEKDKGV
HHEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHEEHHHHHHHHHCCCCCCCE
LILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATDFLAKIK
EEEECCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TSKLTQQVAAAFSNDGVLAQSIKGYSCRDVQVTMAKAVTESISSCNNLVVEAGTGVGKT
CHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHH
FAYLIPALLSGKQVIVSTGSKNLQEQLFYKDLPALLSMLELTPKVALLKGRNNYLCQHLM
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
AKELSGASSMDPQVLDDLLRINQWAGQTTDGDIGGLTSVTESSQALPLIVSAKETCIGQR
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHC
CDHYDDCFTRKARNRAMDARVIVVNHHLFLADRILKETGFAELLPDSDVVIFDEAHLLPD
CCCHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCHHCCCCCCEEEEECCHHCHH
IAVTYFGQQCSTRQLSDLFDKLIEIYRLELRDAKQIELLSARCAAMLNEWHQMLFNIGDT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
DWRRLLANKALSVLSWGLLKEIKVLQQLLLGHVGRSDNLDDEIEKLQVLANKLELFFLCE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEC
NNQAAYSIDYGHRYLVLRIAPIDVAKECRKLFESNLAWIFTSATLQINRDLSLFTRQLGL
CCCEEEEEECCCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHCH
GKCQEILLESPFDYQNNALFCVPRHLASVNNHHVALNQFVDVCVKAINAAKGRTFILFTS
HHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEC
HRMLNLVAPALQRRVSYPLLVQGQANKQSLLKKYRQLGNAVLLGTGAFWEGVDVRGRLLS
HHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHH
CVIIDKLPFVSPDDNLFRARSESIEREGKDAFSEISLPQAVITLNQGVGRLIRDEKDKGV
HHEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHEEHHHHHHHHHCCCCCCCE
LILCDNRIVNKPYGQAFLNSLPPMSRTRDLDKATDFLAKIK
EEEECCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]