Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623758

Identifier: 167623758

GI number: 167623758

Start: 2186117

End: 2186449

Strand: Direct

Name: 167623758

Synonym: Shal_1828

Alternate gene names: NA

Gene position: 2186117-2186449 (Clockwise)

Preceding gene: 167623757

Following gene: 167623759

Centisome position: 41.82

GC content: 46.55

Gene sequence:

>333_bases
ATGCAGATTAATTCAAGCCAGCTTACAACGACTCATGCTGCAGCTAATGCAACAAGTCGGGTTGAAGTTAACAAGTCGGT
TGCTTCAAACCAGACTAGTGCTTTGGCTTCTGGTGCTATTGAGGCGTCTGGGTTAATCAAAGCGCAGCAATCGTTCACGA
TTAATGATTATCAAGAAGACGAGCTAGCGTTACAGTCGAGATTAGGTGCCCATGTGGAGTACGAGAACCATACGGGTGGG
CATCGCGGCGCTGTGGCGGAGTATTTAGTCAATCAACATGCTGCTAAGCGGGAAGAGATTAAACAGATGGTTGGGATAGA
TACCTATGCATAA

Upstream 100 bases:

>100_bases
TAGAGAGTAATCTTAAAACGCGAGCCCTGTATATTAGCGAACTAGAATTTTTGTTCTATATTGAGATTGACGCTAAAGCA
GGTACATTAAGGACGATTTG

Downstream 100 bases:

>100_bases
GTCTCAATTTCATTCCAGTACGCAATCTGGTGCTCAATCAGGCTCCCAATACAGTAATAGCATGCCATCGTCAGGCGCCC
CTGGGCGTACTCGCTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQINSSQLTTTHAAANATSRVEVNKSVASNQTSALASGAIEASGLIKAQQSFTINDYQEDELALQSRLGAHVEYENHTGG
HRGAVAEYLVNQHAAKREEIKQMVGIDTYA

Sequences:

>Translated_110_residues
MQINSSQLTTTHAAANATSRVEVNKSVASNQTSALASGAIEASGLIKAQQSFTINDYQEDELALQSRLGAHVEYENHTGG
HRGAVAEYLVNQHAAKREEIKQMVGIDTYA
>Mature_110_residues
MQINSSQLTTTHAAANATSRVEVNKSVASNQTSALASGAIEASGLIKAQQSFTINDYQEDELALQSRLGAHVEYENHTGG
HRGAVAEYLVNQHAAKREEIKQMVGIDTYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11815; Mature: 11815

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINSSQLTTTHAAANATSRVEVNKSVASNQTSALASGAIEASGLIKAQQSFTINDYQED
CCCCCCCCCHHHHHCCCCCCEEECHHHHCCHHHHHHHCCCCCCCCEECCCCCCCCCCCHH
ELALQSRLGAHVEYENHTGGHRGAVAEYLVNQHAAKREEIKQMVGIDTYA
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQINSSQLTTTHAAANATSRVEVNKSVASNQTSALASGAIEASGLIKAQQSFTINDYQED
CCCCCCCCCHHHHHCCCCCCEEECHHHHCCHHHHHHHCCCCCCCCEECCCCCCCCCCCHH
ELALQSRLGAHVEYENHTGGHRGAVAEYLVNQHAAKREEIKQMVGIDTYA
HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA