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The map label for this gene is yedF [H]

Identifier: 167622441

GI number: 167622441

Start: 604534

End: 604770

Strand: Direct

Name: yedF [H]

Synonym: Shal_0501

Alternate gene names: 167622441

Gene position: 604534-604770 (Clockwise)

Preceding gene: 167622440

Following gene: 167622443

Centisome position: 11.57

GC content: 44.73

Gene sequence:

>237_bases
ATGCCAGCAACTATCGTACCTGATTACAATCTAGAAATTTATGGTGAGCCTTGTCCTTACCCTGCCGTGGCGACACTTGA
GGCGATGCAGTCACTCAAACCGGGTGAAGTATTAGAAGTGATTACCGATTGTTCACAGTCGATCAATAATATTCCTAACG
ATGCTAAGAACCACGGTTACGAGGTTCTCGATATCAGCCAGCAGGGTGTGATGCTACGTTACTTACTGAAGAAGTAA

Upstream 100 bases:

>100_bases
AGAGGCCGCTAGCGTTAAAGGCTAAAGGCTATATTGATAACAGCATTTACTTTATATTCGGCTCAAGTTGATTTGAGCCT
TTTTTGCTGAGGAGCATAAT

Downstream 100 bases:

>100_bases
TTGCAAATCGCAGACAATAAAAAAGGCACTCATTGAGTGCCTTTTTGCTGACTCGCGTTTCGCGAGTCAGTAGAGGTAAG
CGTTAATAGTAGTAACTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MPATIVPDYNLEIYGEPCPYPAVATLEAMQSLKPGEVLEVITDCSQSINNIPNDAKNHGYEVLDISQQGVMLRYLLKK

Sequences:

>Translated_78_residues
MPATIVPDYNLEIYGEPCPYPAVATLEAMQSLKPGEVLEVITDCSQSINNIPNDAKNHGYEVLDISQQGVMLRYLLKK
>Mature_77_residues
PATIVPDYNLEIYGEPCPYPAVATLEAMQSLKPGEVLEVITDCSQSINNIPNDAKNHGYEVLDISQQGVMLRYLLKK

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

Organism=Escherichia coli, GI1788239, Length=74, Percent_Identity=71.6216216216216, Blast_Score=114, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 8652; Mature: 8521

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATIVPDYNLEIYGEPCPYPAVATLEAMQSLKPGEVLEVITDCSQSINNIPNDAKNHGY
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
EVLDISQQGVMLRYLLKK
EEEEECCCCHHHHHHHCC
>Mature Secondary Structure 
PATIVPDYNLEIYGEPCPYPAVATLEAMQSLKPGEVLEVITDCSQSINNIPNDAKNHGY
CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCE
EVLDISQQGVMLRYLLKK
EEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]