Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622443

Identifier: 167622443

GI number: 167622443

Start: 606401

End: 608467

Strand: Direct

Name: 167622443

Synonym: Shal_0503

Alternate gene names: NA

Gene position: 606401-608467 (Clockwise)

Preceding gene: 167622441

Following gene: 167622445

Centisome position: 11.6

GC content: 47.65

Gene sequence:

>2067_bases
ATGAGAAAATTTAATAAATGTAGTGTGGCATTAATTGTCGCCACCGCTTTCGGTCTAGCAGCCTGTAGTGACGGTAAAGA
TGGTAGTGATGATGAAGATGGCATCAGCCCGCTGCCACCCGTCGTCGACGCGACAGAGATCACCAATGTTGAAGTGCTGA
GCCACACCCTAGAAGAGGGCGTGGTGCGTTTTGAGTTTGAAGTCACTAACGAGGAGGGGCTGCTTGTCAGTGGCCTCGAA
AAAGTGAGCGCTGAGGTTGCGGAGCTGACAGATAAAGGCATCGCACGCAGCCGTCCTGATTTCGAAGGCACCATTGCTGG
TGGTAATGCTAATGAGGAGACTGAAGGGGCAAGTCTCAACATGACTGAAAATGGTCGTTATGAATTTTTAGCACCCATGC
CAGCAGTCAATGCAGGGACAGAGGGGATCATTCGACTCGCAGTCGGAGGCGGTGAGAATATCGCCAAGTCAAACTATATT
GTCGTTGATAAGACGGAAAGCCTACACACCACTTCAACGGCGACTTGTCATGGTTGTCACGTCGATTATGCGGCGTCTAA
ATTAAAGCATCCAAGCTACACGGCCATTAATACCGATGGCGAAACCGATCTGGTCGCAGGCTGTATGGTTTGTCATGGTA
ATGTGGTGCGTGATAAAGGCGGTTATGCAAAAAATACAATGCAGAAGATTGGTCATATCAATCATCAGAAGTTTGAAAAA
GACTTTGAGCCTGCTAATTGCTACACCTGTCATGCAGAGCCTATCACCAAGGTAAATAGCATGGATACCTGTACCGACTG
TCATGATGCTGCAGGCGTTGGTACGACTTCGGTTGCGATGACCTACAGTAGCTTCGACGAGACCGATGACGTGCGTCAAT
TCCATAAGAAAGTGGGTGAAAGAGCCGACATTAGAGCGCAGCATTACACGACGACATCAGCCCCATACACCAATAGCAGT
TTGGAGTGGGATGACCATGAAACAACCGGAGGCTGGTGTACTGATATCGCACTGTTTAATACCGATTCAGGAACAGACGT
ACAGCTTAATATTGCACAGTTATATGCAGCAGGCACGTTAACCTATGCGGGAGCCTATATTCACGCCTATGACAATGATT
CAATAGTCGGTCGCCCAAGCCCACGAGATTCTGGTGGCGTAACAAATAGCCAGTATATTGAAAATCCTGATGGCTCTAGA
GCGGCGTGTTACGTGCGCTTAGATGGTATTGATGCAGGCTTCGCTAATGCAGGCTTTACCGCAAGCTCGAGAGTGACCTT
CAAGCAGCAAGATGACGATGGCGGCTATGATGGTGTTTCACTGACGAGTTACTCGGACGTTGTTGATAGAAATGAGGAAA
AACTGCAAGAGTATAACCGTCGCCACAGCGTCACACTTGATAGCTGTACCACTTGTCATAACAACGAGACTAACTATCAC
AAGAATGGTAGCTATAGTGATGGTGGTTTAGATTGTGTGGCTTGTCATAACAATGGTCAAGATCGCGCAGGACAGCGAGT
CGTTGCAATGGATGCATTTGAAACCGATAGCTTCCGCATTAATGCTGGCTACACCATTGCAGTAAAGAATAGCGATGGAG
AACAAACGGGTTGGAAAGCGAATAGTGCGCCAGGCTTTGGTCCGTTAGTGCATGCACAACACTGGGGATTGCAGTCTGTT
ATTGGCTCTGAAATTAGCCGAGATAATGAGGTTGCGCTAACAAACTCAGCGGCAAAGCTGAATGCCGATAACTGCGTGGC
TTGTCATGCCGATGGTATCGATCTTAACGCTGTACCAAACCAGTATATGCTTTCTAGAGCCTTCAATGGTGGAAATGCCG
GAGAGTCTGGTGTTGCCTCAAGTCCTATTACCGCAAACTGTTTTGCCTGTCATAATAATGACCAAGCGCTGAACCATATG
ATCTCAAACGGTGGTGAGCTTAACCTTGAAGTAAACAAAGCGGGTGATTGGTTTACCCAAGGCACATCTGAGTCTTGTGC
AACGTGTCATGCAGAGGGGCGCTCATACGGAATTGAGAAGTATCACGTGTTTGACCGTAAAGAATAA

Upstream 100 bases:

>100_bases
TAATTGTTGGGGAATTTGTCACAAAAATGAGCCGTTACTACTAATAAGGTATTTACGGGGGAGTAAAAGGTCACGACTTA
ATAAAAATTATGGAGTGATG

Downstream 100 bases:

>100_bases
AAAGTAAGGGCTAGCTTCTCCCTGCAAATAGTTAGCCCATGACTTTTTGAGGCGCGATTTAACCTCTATTCGAGATAGTT
TTCTGCTGATTTTGAATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MRKFNKCSVALIVATAFGLAACSDGKDGSDDEDGISPLPPVVDATEITNVEVLSHTLEEGVVRFEFEVTNEEGLLVSGLE
KVSAEVAELTDKGIARSRPDFEGTIAGGNANEETEGASLNMTENGRYEFLAPMPAVNAGTEGIIRLAVGGGENIAKSNYI
VVDKTESLHTTSTATCHGCHVDYAASKLKHPSYTAINTDGETDLVAGCMVCHGNVVRDKGGYAKNTMQKIGHINHQKFEK
DFEPANCYTCHAEPITKVNSMDTCTDCHDAAGVGTTSVAMTYSSFDETDDVRQFHKKVGERADIRAQHYTTTSAPYTNSS
LEWDDHETTGGWCTDIALFNTDSGTDVQLNIAQLYAAGTLTYAGAYIHAYDNDSIVGRPSPRDSGGVTNSQYIENPDGSR
AACYVRLDGIDAGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDRNEEKLQEYNRRHSVTLDSCTTCHNNETNYH
KNGSYSDGGLDCVACHNNGQDRAGQRVVAMDAFETDSFRINAGYTIAVKNSDGEQTGWKANSAPGFGPLVHAQHWGLQSV
IGSEISRDNEVALTNSAAKLNADNCVACHADGIDLNAVPNQYMLSRAFNGGNAGESGVASSPITANCFACHNNDQALNHM
ISNGGELNLEVNKAGDWFTQGTSESCATCHAEGRSYGIEKYHVFDRKE

Sequences:

>Translated_688_residues
MRKFNKCSVALIVATAFGLAACSDGKDGSDDEDGISPLPPVVDATEITNVEVLSHTLEEGVVRFEFEVTNEEGLLVSGLE
KVSAEVAELTDKGIARSRPDFEGTIAGGNANEETEGASLNMTENGRYEFLAPMPAVNAGTEGIIRLAVGGGENIAKSNYI
VVDKTESLHTTSTATCHGCHVDYAASKLKHPSYTAINTDGETDLVAGCMVCHGNVVRDKGGYAKNTMQKIGHINHQKFEK
DFEPANCYTCHAEPITKVNSMDTCTDCHDAAGVGTTSVAMTYSSFDETDDVRQFHKKVGERADIRAQHYTTTSAPYTNSS
LEWDDHETTGGWCTDIALFNTDSGTDVQLNIAQLYAAGTLTYAGAYIHAYDNDSIVGRPSPRDSGGVTNSQYIENPDGSR
AACYVRLDGIDAGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDRNEEKLQEYNRRHSVTLDSCTTCHNNETNYH
KNGSYSDGGLDCVACHNNGQDRAGQRVVAMDAFETDSFRINAGYTIAVKNSDGEQTGWKANSAPGFGPLVHAQHWGLQSV
IGSEISRDNEVALTNSAAKLNADNCVACHADGIDLNAVPNQYMLSRAFNGGNAGESGVASSPITANCFACHNNDQALNHM
ISNGGELNLEVNKAGDWFTQGTSESCATCHAEGRSYGIEKYHVFDRKE
>Mature_688_residues
MRKFNKCSVALIVATAFGLAACSDGKDGSDDEDGISPLPPVVDATEITNVEVLSHTLEEGVVRFEFEVTNEEGLLVSGLE
KVSAEVAELTDKGIARSRPDFEGTIAGGNANEETEGASLNMTENGRYEFLAPMPAVNAGTEGIIRLAVGGGENIAKSNYI
VVDKTESLHTTSTATCHGCHVDYAASKLKHPSYTAINTDGETDLVAGCMVCHGNVVRDKGGYAKNTMQKIGHINHQKFEK
DFEPANCYTCHAEPITKVNSMDTCTDCHDAAGVGTTSVAMTYSSFDETDDVRQFHKKVGERADIRAQHYTTTSAPYTNSS
LEWDDHETTGGWCTDIALFNTDSGTDVQLNIAQLYAAGTLTYAGAYIHAYDNDSIVGRPSPRDSGGVTNSQYIENPDGSR
AACYVRLDGIDAGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDRNEEKLQEYNRRHSVTLDSCTTCHNNETNYH
KNGSYSDGGLDCVACHNNGQDRAGQRVVAMDAFETDSFRINAGYTIAVKNSDGEQTGWKANSAPGFGPLVHAQHWGLQSV
IGSEISRDNEVALTNSAAKLNADNCVACHADGIDLNAVPNQYMLSRAFNGGNAGESGVASSPITANCFACHNNDQALNHM
ISNGGELNLEVNKAGDWFTQGTSESCATCHAEGRSYGIEKYHVFDRKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73792; Mature: 73792

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFNKCSVALIVATAFGLAACSDGKDGSDDEDGISPLPPVVDATEITNVEVLSHTLEEG
CCCCCCCCEEEEEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHCC
VVRFEFEVTNEEGLLVSGLEKVSAEVAELTDKGIARSRPDFEGTIAGGNANEETEGASLN
EEEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEE
MTENGRYEFLAPMPAVNAGTEGIIRLAVGGGENIAKSNYIVVDKTESLHTTSTATCHGCH
ECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCC
VDYAASKLKHPSYTAINTDGETDLVAGCMVCHGNVVRDKGGYAKNTMQKIGHINHQKFEK
CHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCHHHHHC
DFEPANCYTCHAEPITKVNSMDTCTDCHDAAGVGTTSVAMTYSSFDETDDVRQFHKKVGE
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCC
RADIRAQHYTTTSAPYTNSSLEWDDHETTGGWCTDIALFNTDSGTDVQLNIAQLYAAGTL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHEEECCCE
TYAGAYIHAYDNDSIVGRPSPRDSGGVTNSQYIENPDGSRAACYVRLDGIDAGFANAGFT
EEEEEEEEEECCCCEECCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCC
ASSRVTFKQQDDDGGYDGVSLTSYSDVVDRNEEKLQEYNRRHSVTLDSCTTCHNNETNYH
CCCEEEEEECCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCC
KNGSYSDGGLDCVACHNNGQDRAGQRVVAMDAFETDSFRINAGYTIAVKNSDGEQTGWKA
CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCCCCCC
NSAPGFGPLVHAQHWGLQSVIGSEISRDNEVALTNSAAKLNADNCVACHADGIDLNAVPN
CCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCEECCCCCC
QYMLSRAFNGGNAGESGVASSPITANCFACHNNDQALNHMISNGGELNLEVNKAGDWFTQ
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEC
GTSESCATCHAEGRSYGIEKYHVFDRKE
CCCCCHHEEECCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MRKFNKCSVALIVATAFGLAACSDGKDGSDDEDGISPLPPVVDATEITNVEVLSHTLEEG
CCCCCCCCEEEEEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHCC
VVRFEFEVTNEEGLLVSGLEKVSAEVAELTDKGIARSRPDFEGTIAGGNANEETEGASLN
EEEEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEE
MTENGRYEFLAPMPAVNAGTEGIIRLAVGGGENIAKSNYIVVDKTESLHTTSTATCHGCH
ECCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCC
VDYAASKLKHPSYTAINTDGETDLVAGCMVCHGNVVRDKGGYAKNTMQKIGHINHQKFEK
CHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCHHHHHC
DFEPANCYTCHAEPITKVNSMDTCTDCHDAAGVGTTSVAMTYSSFDETDDVRQFHKKVGE
CCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCC
RADIRAQHYTTTSAPYTNSSLEWDDHETTGGWCTDIALFNTDSGTDVQLNIAQLYAAGTL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHEEECCCE
TYAGAYIHAYDNDSIVGRPSPRDSGGVTNSQYIENPDGSRAACYVRLDGIDAGFANAGFT
EEEEEEEEEECCCCEECCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCC
ASSRVTFKQQDDDGGYDGVSLTSYSDVVDRNEEKLQEYNRRHSVTLDSCTTCHNNETNYH
CCCEEEEEECCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCC
KNGSYSDGGLDCVACHNNGQDRAGQRVVAMDAFETDSFRINAGYTIAVKNSDGEQTGWKA
CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCCCCCC
NSAPGFGPLVHAQHWGLQSVIGSEISRDNEVALTNSAAKLNADNCVACHADGIDLNAVPN
CCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCEECCCCCC
QYMLSRAFNGGNAGESGVASSPITANCFACHNNDQALNHMISNGGELNLEVNKAGDWFTQ
HHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEC
GTSESCATCHAEGRSYGIEKYHVFDRKE
CCCCCHHEEECCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA