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The map label for this gene is yedE [H]

Identifier: 167622440

GI number: 167622440

Start: 603217

End: 604458

Strand: Direct

Name: yedE [H]

Synonym: Shal_0500

Alternate gene names: 167622440

Gene position: 603217-604458 (Clockwise)

Preceding gene: 167622439

Following gene: 167622441

Centisome position: 11.54

GC content: 49.11

Gene sequence:

>1242_bases
ATGTGGTTAACGTTTAAAAATCAGTTTTTTATTAAATTTTGGTCGCCTTTTGCCGCCGTTATTGCGGCAGGTATTTTGTC
GACCTACTTTTTTGGTCTTACCGGATCACTTTGGGCGGTAACGGGGGAGTTTACTCGCTGGGGTGGGCATATATTGCAGT
GGTTCGGCGCAGAGCCGGAGTCATGGCAATATTTTAAGATCATTGGTTTACAGGGAACACCGCTGGACCGTGTGGGCGGC
GTGATGATTATTGGTATGTTTGGTGGTTGTTTAGCTGCGGTGCTATGGGCCAACAACATGAAGCTACGTATGCCAAGCTC
CAAGAAGCGCATCGCACAGGCGCTGATAGGTGGCATGATTGCAGGCTTTGGCGCGCGCCTTGCCATGGGTTGTAACTTGG
CTGCTTTCTTCACCGGTATTCCGCAATTTACGCTGCACGCGTGGATTTTTGCCTTTGCGGCCGCCGCAGGTACTTATATT
GGCGCTAAGATCACCTTGTTGCCGTTTTTCCGCTCAACGGCCACGGTAAAGTTAGGTGGACTTAAGAAAATTGCCAAGCC
TAATCCAAATCAGGTACAAAACCGTTTCCGCTTGGGCTGGGTTGTGTTTGCAGCCATGATAGTGGGGTCACTCTATATCA
TGCAGAGCTCGACTAAGCTGGGCATTGCCATGTTAATGGGCATTATATTTGGCCTGTTGATTGAGCGCGCGCAGATCTGC
TTTACCTCAGCATTTAGAGATATGTGGATCACTGGCCGTACCCATATGGCTAAGGCGATTATCTTAGGCATGGCTGTGAG
TGTTATCGGCATTTACAGCTATGTGCAGCTAGGCATGACGCCTAAAACCCTGTGGGCTGGTCCGAATGCGGTGATTGGTG
GCTTACTATTTGGCATCGGTATTGTTATCGCGGGCGGCTGTGAAACCGGTTGGATGTACCGTGCATTAGAAGGCCAAGTG
CATTTTTGGTGGGTGGGGCTTGGTAACATTATCGGCGCGACCATTTTGGCTTATTACTGGGATGATATTGCCGCCCCATT
AGCAACTGACTGGGATAAAATCAATTTACTCGATCTGTTTGGACCGTTAGGCGGTCTAGGTGTCACCTATCTATTGCTGG
GCTTATCCTTTGTGCTGATTTTAGTCTGGGAGCAGCGCTTCTTTAAAAAGCAAAACAGCTTGAAAGAAGCTGCACTAGCC
AATGTCGCCCATCAAGCAGAGGCCGCTAGCGTTAAAGGCTAA

Upstream 100 bases:

>100_bases
TTGATAACAATAACTTAGCTGTTATGTAATTAGGCTTGTAATTCAATCTTTTAATTTAGGTTGTAATTTAAGCACTTAAT
GTTAGTTGGTAATTTTAACT

Downstream 100 bases:

>100_bases
AGGCTATATTGATAACAGCATTTACTTTATATTCGGCTCAAGTTGATTTGAGCCTTTTTTGCTGAGGAGCATAATATGCC
AGCAACTATCGTACCTGATT

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MWLTFKNQFFIKFWSPFAAVIAAGILSTYFFGLTGSLWAVTGEFTRWGGHILQWFGAEPESWQYFKIIGLQGTPLDRVGG
VMIIGMFGGCLAAVLWANNMKLRMPSSKKRIAQALIGGMIAGFGARLAMGCNLAAFFTGIPQFTLHAWIFAFAAAAGTYI
GAKITLLPFFRSTATVKLGGLKKIAKPNPNQVQNRFRLGWVVFAAMIVGSLYIMQSSTKLGIAMLMGIIFGLLIERAQIC
FTSAFRDMWITGRTHMAKAIILGMAVSVIGIYSYVQLGMTPKTLWAGPNAVIGGLLFGIGIVIAGGCETGWMYRALEGQV
HFWWVGLGNIIGATILAYYWDDIAAPLATDWDKINLLDLFGPLGGLGVTYLLLGLSFVLILVWEQRFFKKQNSLKEAALA
NVAHQAEAASVKG

Sequences:

>Translated_413_residues
MWLTFKNQFFIKFWSPFAAVIAAGILSTYFFGLTGSLWAVTGEFTRWGGHILQWFGAEPESWQYFKIIGLQGTPLDRVGG
VMIIGMFGGCLAAVLWANNMKLRMPSSKKRIAQALIGGMIAGFGARLAMGCNLAAFFTGIPQFTLHAWIFAFAAAAGTYI
GAKITLLPFFRSTATVKLGGLKKIAKPNPNQVQNRFRLGWVVFAAMIVGSLYIMQSSTKLGIAMLMGIIFGLLIERAQIC
FTSAFRDMWITGRTHMAKAIILGMAVSVIGIYSYVQLGMTPKTLWAGPNAVIGGLLFGIGIVIAGGCETGWMYRALEGQV
HFWWVGLGNIIGATILAYYWDDIAAPLATDWDKINLLDLFGPLGGLGVTYLLLGLSFVLILVWEQRFFKKQNSLKEAALA
NVAHQAEAASVKG
>Mature_413_residues
MWLTFKNQFFIKFWSPFAAVIAAGILSTYFFGLTGSLWAVTGEFTRWGGHILQWFGAEPESWQYFKIIGLQGTPLDRVGG
VMIIGMFGGCLAAVLWANNMKLRMPSSKKRIAQALIGGMIAGFGARLAMGCNLAAFFTGIPQFTLHAWIFAFAAAAGTYI
GAKITLLPFFRSTATVKLGGLKKIAKPNPNQVQNRFRLGWVVFAAMIVGSLYIMQSSTKLGIAMLMGIIFGLLIERAQIC
FTSAFRDMWITGRTHMAKAIILGMAVSVIGIYSYVQLGMTPKTLWAGPNAVIGGLLFGIGIVIAGGCETGWMYRALEGQV
HFWWVGLGNIIGATILAYYWDDIAAPLATDWDKINLLDLFGPLGGLGVTYLLLGLSFVLILVWEQRFFKKQNSLKEAALA
NVAHQAEAASVKG

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=399, Percent_Identity=68.4210526315789, Blast_Score=529, Evalue=1e-151,
Organism=Escherichia coli, GI1788323, Length=102, Percent_Identity=38.2352941176471, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 45015; Mature: 45015

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLTFKNQFFIKFWSPFAAVIAAGILSTYFFGLTGSLWAVTGEFTRWGGHILQWFGAEPE
CEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCC
SWQYFKIIGLQGTPLDRVGGVMIIGMFGGCLAAVLWANNMKLRMPSSKKRIAQALIGGMI
CCEEEEEEECCCCCHHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
AGFGARLAMGCNLAAFFTGIPQFTLHAWIFAFAAAAGTYIGAKITLLPFFRSTATVKLGG
HHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCEEEECC
LKKIAKPNPNQVQNRFRLGWVVFAAMIVGSLYIMQSSTKLGIAMLMGIIFGLLIERAQIC
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
FTSAFRDMWITGRTHMAKAIILGMAVSVIGIYSYVQLGMTPKTLWAGPNAVIGGLLFGIG
HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH
IVIAGGCETGWMYRALEGQVHFWWVGLGNIIGATILAYYWDDIAAPLATDWDKINLLDLF
HHEECCCCCCCEEHEECCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GPLGGLGVTYLLLGLSFVLILVWEQRFFKKQNSLKEAALANVAHQAEAASVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWLTFKNQFFIKFWSPFAAVIAAGILSTYFFGLTGSLWAVTGEFTRWGGHILQWFGAEPE
CEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCC
SWQYFKIIGLQGTPLDRVGGVMIIGMFGGCLAAVLWANNMKLRMPSSKKRIAQALIGGMI
CCEEEEEEECCCCCHHHHCCEEEEHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
AGFGARLAMGCNLAAFFTGIPQFTLHAWIFAFAAAAGTYIGAKITLLPFFRSTATVKLGG
HHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCEEEECC
LKKIAKPNPNQVQNRFRLGWVVFAAMIVGSLYIMQSSTKLGIAMLMGIIFGLLIERAQIC
CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
FTSAFRDMWITGRTHMAKAIILGMAVSVIGIYSYVQLGMTPKTLWAGPNAVIGGLLFGIG
HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHH
IVIAGGCETGWMYRALEGQVHFWWVGLGNIIGATILAYYWDDIAAPLATDWDKINLLDLF
HHEECCCCCCCEEHEECCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GPLGGLGVTYLLLGLSFVLILVWEQRFFKKQNSLKEAALANVAHQAEAASVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]