| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622373
Identifier: 167622373
GI number: 167622373
Start: 507652
End: 508158
Strand: Direct
Name: 167622373
Synonym: Shal_0433
Alternate gene names: NA
Gene position: 507652-508158 (Clockwise)
Preceding gene: 167622372
Following gene: 167622376
Centisome position: 9.71
GC content: 45.17
Gene sequence:
>507_bases ATGCCTCAGGTTTATGCACTGGCACCACTCACGTCAGGGGGTTACTGGAGCTTCATTGCTTTGCTAGCGATTTTAGTCGG ATTGTTGACTTTTATCTATTTCAGTACGCTACCCGAGATCAGTAAAATCATCAGTTTTGGGTTACTCCTGCTCACGCTGT TTGCGTTTAGTTGGGTGTTCTATAAGGCAGATGATTCTAAGTTGATTATTGGCGATGACACGTTAACCCTTGATGTGCCA TTTTACGCGATCACCCTGCCGCTTGCCGAGGTGAAGATAAAAGAGATCCAGCGTCTAGATTGGCAGCGGGATCCCGATTT AAAACTCGAGTCTCGTCACAATGGTGTCGGTATGGCGGGTTATCAATTAGGTTGGTTTAAATTGTCCAATAAACAAAAAG CCTTTGTCGCAATGAGCGAAGAACAAAATCTGGTGATGATCCCAACGCTCCGTGGATACCGGATCATATTGAGTCTACAA GAGCCGGATAGGTTATTGAGTCGATAG
Upstream 100 bases:
>100_bases ATACTGATTGGTATTTGAGTCATATGGAAGAAAGGCTTAAAGGATGACAAAAGTTATTGTCATCTAAAAATCTGAACACC ATAGCTAATTAGGAGCGCCC
Downstream 100 bases:
>100_bases CCAAAAAAAAAAGCGAACCAGAATAAGGTTCGCTTTTTTTGTTAGGCGTTATAGCTTAGGTTTTCGTTTATAGAACATAT CTACCGTAAACAGGAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPQVYALAPLTSGGYWSFIALLAILVGLLTFIYFSTLPEISKIISFGLLLLTLFAFSWVFYKADDSKLIIGDDTLTLDVP FYAITLPLAEVKIKEIQRLDWQRDPDLKLESRHNGVGMAGYQLGWFKLSNKQKAFVAMSEEQNLVMIPTLRGYRIILSLQ EPDRLLSR
Sequences:
>Translated_168_residues MPQVYALAPLTSGGYWSFIALLAILVGLLTFIYFSTLPEISKIISFGLLLLTLFAFSWVFYKADDSKLIIGDDTLTLDVP FYAITLPLAEVKIKEIQRLDWQRDPDLKLESRHNGVGMAGYQLGWFKLSNKQKAFVAMSEEQNLVMIPTLRGYRIILSLQ EPDRLLSR >Mature_167_residues PQVYALAPLTSGGYWSFIALLAILVGLLTFIYFSTLPEISKIISFGLLLLTLFAFSWVFYKADDSKLIIGDDTLTLDVPF YAITLPLAEVKIKEIQRLDWQRDPDLKLESRHNGVGMAGYQLGWFKLSNKQKAFVAMSEEQNLVMIPTLRGYRIILSLQE PDRLLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19107; Mature: 18976
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVYALAPLTSGGYWSFIALLAILVGLLTFIYFSTLPEISKIISFGLLLLTLFAFSWVF CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE YKADDSKLIIGDDTLTLDVPFYAITLPLAEVKIKEIQRLDWQRDPDLKLESRHNGVGMAG EECCCCEEEEECCEEEEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC YQLGWFKLSNKQKAFVAMSEEQNLVMIPTLRGYRIILSLQEPDRLLSR EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCHHHHCC >Mature Secondary Structure PQVYALAPLTSGGYWSFIALLAILVGLLTFIYFSTLPEISKIISFGLLLLTLFAFSWVF CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEE YKADDSKLIIGDDTLTLDVPFYAITLPLAEVKIKEIQRLDWQRDPDLKLESRHNGVGMAG EECCCCEEEEECCEEEEECCCEEEEECHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC YQLGWFKLSNKQKAFVAMSEEQNLVMIPTLRGYRIILSLQEPDRLLSR EEEEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA