Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622256

Identifier: 167622256

GI number: 167622256

Start: 375346

End: 375738

Strand: Direct

Name: 167622256

Synonym: Shal_0315

Alternate gene names: NA

Gene position: 375346-375738 (Clockwise)

Preceding gene: 167622254

Following gene: 167622257

Centisome position: 7.18

GC content: 45.04

Gene sequence:

>393_bases
GTGGCCATTCAAAAAATAATATTAACTAGCCAAAGCTTAGCGATAATCGTCATTATGTTTGTAAGCTTAAATGTGGAGGC
TGTCGAAGCAGAACCCACAATAAACAGCGGGCACTCTTTGTCGGAGCAAGCGGAAAAAACTAAGTATCGAGTCGAACAGG
AGCAACTTCAAAAAGCCCGTGACGCAGCCAAGAGCAGGGAGGAGCGTGAAACTAAAGTGCTTGAAAGACAAGAGTCTGGT
GATTGGGAGGGGGAGCAAAAGGAAAAAGCACAGAAGCAATTTAAGCAACGGGGAACGCTCCAAGAGAAGTACTTACGAGA
AGCTCGAGAGGCGGCGAGCAGCGAACGCAAAATCCCCAAACCTTTTAATAGTGAATTATTACGAAATAAGTAG

Upstream 100 bases:

>100_bases
AGCAGAATACCCTCAAGGATTGGATAAAAGGTGATGTCAATGTGAATGAATTGGTTAGAATAGGTCATTTATAGAAGCGC
TTCTTAGGAAAGGAATAAAA

Downstream 100 bases:

>100_bases
AGTTAGGAATATCCAGTGAGTATTTGTCCCTTGTGTCAACAGCCTGATTTACAGGCTTTCCATCAAGATAAGTTTAGAGA
GTATCAGCGCTGCGATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAIQKIILTSQSLAIIVIMFVSLNVEAVEAEPTINSGHSLSEQAEKTKYRVEQEQLQKARDAAKSREERETKVLERQESG
DWEGEQKEKAQKQFKQRGTLQEKYLREAREAASSERKIPKPFNSELLRNK

Sequences:

>Translated_130_residues
MAIQKIILTSQSLAIIVIMFVSLNVEAVEAEPTINSGHSLSEQAEKTKYRVEQEQLQKARDAAKSREERETKVLERQESG
DWEGEQKEKAQKQFKQRGTLQEKYLREAREAASSERKIPKPFNSELLRNK
>Mature_129_residues
AIQKIILTSQSLAIIVIMFVSLNVEAVEAEPTINSGHSLSEQAEKTKYRVEQEQLQKARDAAKSREERETKVLERQESGD
WEGEQKEKAQKQFKQRGTLQEKYLREAREAASSERKIPKPFNSELLRNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15002; Mature: 14871

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIQKIILTSQSLAIIVIMFVSLNVEAVEAEPTINSGHSLSEQAEKTKYRVEQEQLQKAR
CCHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAAKSREERETKVLERQESGDWEGEQKEKAQKQFKQRGTLQEKYLREAREAASSERKIPK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
PFNSELLRNK
CCCHHHHCCC
>Mature Secondary Structure 
AIQKIILTSQSLAIIVIMFVSLNVEAVEAEPTINSGHSLSEQAEKTKYRVEQEQLQKAR
CHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DAAKSREERETKVLERQESGDWEGEQKEKAQKQFKQRGTLQEKYLREAREAASSERKIPK
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
PFNSELLRNK
CCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA