Click here to switch to the map view.

The map label for this gene is yfiP [H]

Identifier: 167622254

GI number: 167622254

Start: 371981

End: 372574

Strand: Direct

Name: yfiP [H]

Synonym: Shal_0313

Alternate gene names: 167622254

Gene position: 371981-372574 (Clockwise)

Preceding gene: 167622253

Following gene: 167622256

Centisome position: 7.12

GC content: 46.97

Gene sequence:

>594_bases
GTGTCCCGTCCAACTTGTCCCAACTGTCACTATCCGCAAAATGCCTGTCTGTGTGCCAGTATTGAAACCATGCAGGTCAA
ATCTGAACTGATTATTTTGCAGGATCCAAGTGAAGTTGGGCATGCGAAGAATAGTGTGCGCCTGCTAGAGCTGGTTATTG
CAGAAACTCGAGTCGTGGTGGGTGAAACTGCCGATGATTTTGCTGCGCTGCGTCAACAATTGGCTGCATCCGAAAAACCT
GTCTACTTAGTTTACCCATCAGAGAACAGCATATCGGCCAATGAGACTAAGGTTGAAGAGGAGGTGATCCTTCTCTTATT
AGATGGCACATGGCGTAAGGCCTACAAGCTGTTGCAGCTTAACCCTTGGCTACAGGATTACCCTGCATTACATCTGGATC
TGGATTCGGCTTCAAATTACACCATACGTAAGGCGAGCCGTAGTGATAGTTTGTCTACGTTAGAAGCTGCGGCAATGATG
CTTAAGGCGATCGATGAAGAGCAAGATGTTGCACCTTTAACTAATGCGTTAAGTGCTATGGTTGAGCAAAGATTAGCTTC
AATGCCTGCCGATGTGCGGGCTCGATATCGATAA

Upstream 100 bases:

>100_bases
CACTAAATTTATTGCGATTGTAATGTCGAGTTATCGTGTAATTTGTAGCAACACTCAGCTACAATTTGCAGGCTACGCTA
AACAATTACTCTGAGGTCTC

Downstream 100 bases:

>100_bases
CATCTATTATTGATAGTTGTTTTTATATTCAATGTTTGAAGCTAAAGAAACTCAGTGGAGTTTAGGTAAAAAATTGATGT
AAGCTTTTGTGATTTATATC

Product: DTW domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSRPTCPNCHYPQNACLCASIETMQVKSELIILQDPSEVGHAKNSVRLLELVIAETRVVVGETADDFAALRQQLAASEKP
VYLVYPSENSISANETKVEEEVILLLLDGTWRKAYKLLQLNPWLQDYPALHLDLDSASNYTIRKASRSDSLSTLEAAAMM
LKAIDEEQDVAPLTNALSAMVEQRLASMPADVRARYR

Sequences:

>Translated_197_residues
MSRPTCPNCHYPQNACLCASIETMQVKSELIILQDPSEVGHAKNSVRLLELVIAETRVVVGETADDFAALRQQLAASEKP
VYLVYPSENSISANETKVEEEVILLLLDGTWRKAYKLLQLNPWLQDYPALHLDLDSASNYTIRKASRSDSLSTLEAAAMM
LKAIDEEQDVAPLTNALSAMVEQRLASMPADVRARYR
>Mature_196_residues
SRPTCPNCHYPQNACLCASIETMQVKSELIILQDPSEVGHAKNSVRLLELVIAETRVVVGETADDFAALRQQLAASEKPV
YLVYPSENSISANETKVEEEVILLLLDGTWRKAYKLLQLNPWLQDYPALHLDLDSASNYTIRKASRSDSLSTLEAAAMML
KAIDEEQDVAPLTNALSAMVEQRLASMPADVRARYR

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Escherichia coli, GI87082133, Length=186, Percent_Identity=23.6559139784946, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 21906; Mature: 21775

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPTCPNCHYPQNACLCASIETMQVKSELIILQDPSEVGHAKNSVRLLELVIAETRVVV
CCCCCCCCCCCCCCCEEEECHHHEEEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHEEE
GETADDFAALRQQLAASEKPVYLVYPSENSISANETKVEEEVILLLLDGTWRKAYKLLQL
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCEEEEEEECCCHHHHHHHHHC
NPWLQDYPALHLDLDSASNYTIRKASRSDSLSTLEAAAMMLKAIDEEQDVAPLTNALSAM
CCCHHHCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VEQRLASMPADVRARYR
HHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
SRPTCPNCHYPQNACLCASIETMQVKSELIILQDPSEVGHAKNSVRLLELVIAETRVVV
CCCCCCCCCCCCCCEEEECHHHEEEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHEEE
GETADDFAALRQQLAASEKPVYLVYPSENSISANETKVEEEVILLLLDGTWRKAYKLLQL
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCEEEEEEECCCHHHHHHHHHC
NPWLQDYPALHLDLDSASNYTIRKASRSDSLSTLEAAAMMLKAIDEEQDVAPLTNALSAM
CCCHHHCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VEQRLASMPADVRARYR
HHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]