Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yhhL [C]

Identifier: 167622226

GI number: 167622226

Start: 342009

End: 342293

Strand: Reverse

Name: yhhL [C]

Synonym: Shal_0285

Alternate gene names: 167622226

Gene position: 342293-342009 (Counterclockwise)

Preceding gene: 167622227

Following gene: 167622224

Centisome position: 6.55

GC content: 40.35

Gene sequence:

>285_bases
ATGAAAGCTATGCTAGTTCTAGGTAAAATTGTTACCGCATTCGCTTGGTTAATGATGCTATATAATTTAGTTTCGCCTTT
TGCAGGCAATATTGCGGTGATCCTCAACATCCTGTTTGCAATGACTATTTTTATGCACTGCTTTCAGACGCTTATCTTCC
ACACTATGTTTAAGCCCCTGCTGCCACTGAAAAAATCAGATTACCTGCAGGTATTCCTTTTCGGCGTATTCAGCCTACTG
CAATATCGCAAGCAGGTAATGGATAAGCAGGTTCAAAACGGTTAA

Upstream 100 bases:

>100_bases
TAAAGAGAAAAAGGCTGGCCAAGTGATCTACCGTTTATATCAATATTCAGCCGAGTCTGCGCTCGATGAAACGACATGTG
ACACCGAGGAAACCAATTAA

Downstream 100 bases:

>100_bases
AGACCGGACAAGCCAAGACAGTACTAAAACGAAAAAGCAAAGACGAGCGCTTCGCTTACGAAAAAGCTGCAATGACACCA
GATTGCAGCTTTTTTAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL
QYRKQVMDKQVQNG

Sequences:

>Translated_94_residues
MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL
QYRKQVMDKQVQNG
>Mature_94_residues
MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPLLPLKKSDYLQVFLFGVFSLL
QYRKQVMDKQVQNG

Specific function: Unknown

COG id: COG3776

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10883; Mature: 10883

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
8.5 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLKKSDYLQVFLFGVFSLLQYRKQVMDKQVQNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAMLVLGKIVTAFAWLMMLYNLVSPFAGNIAVILNILFAMTIFMHCFQTLIFHTMFKPL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLKKSDYLQVFLFGVFSLLQYRKQVMDKQVQNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA