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The map label for this gene is 167622214

Identifier: 167622214

GI number: 167622214

Start: 328314

End: 329381

Strand: Reverse

Name: 167622214

Synonym: Shal_0273

Alternate gene names: NA

Gene position: 329381-328314 (Counterclockwise)

Preceding gene: 167622217

Following gene: 167622206

Centisome position: 6.3

GC content: 44.76

Gene sequence:

>1068_bases
ATGATTCAATTGAGTCACTATCGGTTGCGGATATTCACTATGTTGCTCAATACTGCCTTTATTCGATCTTGCTATATTTC
ACCGGTATTAGAGGGGGTTGAGGCTCATTATGGGGTAACGCCTGCAGATTTAGGCATCCCTGCCTTACTACTGCAAGATA
GGATGACGTTGATCCCTTTCACTGAAGTGTCTAAGTGGTTTGAACAGATTGAGTTGCTAACTGGTGAAGCCGATTTCATG
GTGAAAATTCAGCAGCACCTGACTTTACAAGGGTTAGAGGTTCCCGGGAATTGGTTTTTGCGAGCACCAGATTTAGCCAT
ATCCTTTAGGCGTATCAACCATGGCGTGTGTTGTTTTCAGTCGGGGGCTTGTTACTATGCTCAGCAGTCGGGGAAGATTT
TAAAGTGGTGTTACAGCAATCCATTCGTCAAGGATAAAGCACGAGCTCATGACTCTTTGCGGGTTGCTTTTACCCTGTTT
AATGCCATCAAAAACTACGTTGGCGATAGCTATAGCCCGCGTAAAGTGCGTCTTAGCGGCCCACCGATCCAACAACAAGA
AACAGAACAGCTCTTTGGCTGCCCTGTTTCTTGGAACGCCCCACAAACTGAGATCTGGTTAGGCATTGATCAACTACTGA
TGTCTACTGATGACTACTGCTATATGCCTGAGCCTGTTACAGCGTCAATTCCGCTATCTCAGCTTGAGAAGTATTTAAAT
ATGCCTCAACCTACCGACACCCCAAAAGTGCTTTACGAAATGGTCAATTACTCACGTTATTACGGCTTGCCAAATGTAGA
TACCGTCGCAGCGCTGTTTAATATCTCTCGACAACAACTGCAAAGGCGACTGCAAAAGTTAGGCTTCACTTTTACCTATC
TATCTGGCTATATTCTGTGTAATCAAGCGATAAGATATATGTTGGAAGGGATGGATATTGCAGAGATTGCCAGTCGACTA
GGTTACGCTAATACCCACAGCTTTAGCCGCTCATTCGCCCGTTTTCGCCGCCAAACGCCGACTCAGTATTTAAGTCAACT
CAAGCTAGAAAACAAAAAGCCTCTTTAA

Upstream 100 bases:

>100_bases
ATAGATAAAAACCTCAAAAAAGTGTTTTGGCTGCGCAGTTTGCCTTTTATTTTCATCACCACAAGATGAAGTACACTTAT
GTATCAATTATCGATACTTT

Downstream 100 bases:

>100_bases
AGAGGCTTTTTTTGATTGACTCGCAGGTAACGTTTAACCGTATAGCGGCAACATACCTGCCATCGCCAACAGGTGACATG
CTGCAGTAATAACGCCAAAT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC-Type Transcriptional Regulator; Transcriptional Regulator AraC Family; HTH-Type Transcriptional Regulator AraC Family

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIQLSHYRLRIFTMLLNTAFIRSCYISPVLEGVEAHYGVTPADLGIPALLLQDRMTLIPFTEVSKWFEQIELLTGEADFM
VKIQQHLTLQGLEVPGNWFLRAPDLAISFRRINHGVCCFQSGACYYAQQSGKILKWCYSNPFVKDKARAHDSLRVAFTLF
NAIKNYVGDSYSPRKVRLSGPPIQQQETEQLFGCPVSWNAPQTEIWLGIDQLLMSTDDYCYMPEPVTASIPLSQLEKYLN
MPQPTDTPKVLYEMVNYSRYYGLPNVDTVAALFNISRQQLQRRLQKLGFTFTYLSGYILCNQAIRYMLEGMDIAEIASRL
GYANTHSFSRSFARFRRQTPTQYLSQLKLENKKPL

Sequences:

>Translated_355_residues
MIQLSHYRLRIFTMLLNTAFIRSCYISPVLEGVEAHYGVTPADLGIPALLLQDRMTLIPFTEVSKWFEQIELLTGEADFM
VKIQQHLTLQGLEVPGNWFLRAPDLAISFRRINHGVCCFQSGACYYAQQSGKILKWCYSNPFVKDKARAHDSLRVAFTLF
NAIKNYVGDSYSPRKVRLSGPPIQQQETEQLFGCPVSWNAPQTEIWLGIDQLLMSTDDYCYMPEPVTASIPLSQLEKYLN
MPQPTDTPKVLYEMVNYSRYYGLPNVDTVAALFNISRQQLQRRLQKLGFTFTYLSGYILCNQAIRYMLEGMDIAEIASRL
GYANTHSFSRSFARFRRQTPTQYLSQLKLENKKPL
>Mature_355_residues
MIQLSHYRLRIFTMLLNTAFIRSCYISPVLEGVEAHYGVTPADLGIPALLLQDRMTLIPFTEVSKWFEQIELLTGEADFM
VKIQQHLTLQGLEVPGNWFLRAPDLAISFRRINHGVCCFQSGACYYAQQSGKILKWCYSNPFVKDKARAHDSLRVAFTLF
NAIKNYVGDSYSPRKVRLSGPPIQQQETEQLFGCPVSWNAPQTEIWLGIDQLLMSTDDYCYMPEPVTASIPLSQLEKYLN
MPQPTDTPKVLYEMVNYSRYYGLPNVDTVAALFNISRQQLQRRLQKLGFTFTYLSGYILCNQAIRYMLEGMDIAEIASRL
GYANTHSFSRSFARFRRQTPTQYLSQLKLENKKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40816; Mature: 40816

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLSHYRLRIFTMLLNTAFIRSCYISPVLEGVEAHYGVTPADLGIPALLLQDRMTLIPF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCH
TEVSKWFEQIELLTGEADFMVKIQQHLTLQGLEVPGNWFLRAPDLAISFRRINHGVCCFQ
HHHHHHHHHHHHHCCCCHHHEEEHHHCEEEEEECCCCEEEECCCCEEEHHHHCCCEEEEE
SGACYYAQQSGKILKWCYSNPFVKDKARAHDSLRVAFTLFNAIKNYVGDSYSPRKVRLSG
CCCEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
PPIQQQETEQLFGCPVSWNAPQTEIWLGIDQLLMSTDDYCYMPEPVTASIPLSQLEKYLN
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHC
MPQPTDTPKVLYEMVNYSRYYGLPNVDTVAALFNISRQQLQRRLQKLGFTFTYLSGYILC
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NQAIRYMLEGMDIAEIASRLGYANTHSFSRSFARFRRQTPTQYLSQLKLENKKPL
HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIQLSHYRLRIFTMLLNTAFIRSCYISPVLEGVEAHYGVTPADLGIPALLLQDRMTLIPF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCH
TEVSKWFEQIELLTGEADFMVKIQQHLTLQGLEVPGNWFLRAPDLAISFRRINHGVCCFQ
HHHHHHHHHHHHHCCCCHHHEEEHHHCEEEEEECCCCEEEECCCCEEEHHHHCCCEEEEE
SGACYYAQQSGKILKWCYSNPFVKDKARAHDSLRVAFTLFNAIKNYVGDSYSPRKVRLSG
CCCEEEECCCCCEEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
PPIQQQETEQLFGCPVSWNAPQTEIWLGIDQLLMSTDDYCYMPEPVTASIPLSQLEKYLN
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHC
MPQPTDTPKVLYEMVNYSRYYGLPNVDTVAALFNISRQQLQRRLQKLGFTFTYLSGYILC
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NQAIRYMLEGMDIAEIASRLGYANTHSFSRSFARFRRQTPTQYLSQLKLENKKPL
HHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA