Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622184

Identifier: 167622184

GI number: 167622184

Start: 292389

End: 292883

Strand: Reverse

Name: 167622184

Synonym: Shal_0243

Alternate gene names: NA

Gene position: 292883-292389 (Counterclockwise)

Preceding gene: 167622185

Following gene: 167622181

Centisome position: 5.6

GC content: 50.51

Gene sequence:

>495_bases
ATGTTAGTGGTGACCAACTATCCCAACGTGCCGATTGCAACATCTAATGCTGCAACCGATTCTGCGCGCACGGATAGTCA
GCAGCGCCCACCCATTATTCCGCCGCAACAAGCCACCAAAGGCCATGAAGAACGCGCCTTTAACCCGCAGCATGAACGTA
CTGCAGACCATGCACAAAACCAAGCTAAGCTTCGCGAGTCGGTGCAACAAAAGCAGCAAGGCCAATCTCAGCAGCAAGAG
CAATCTGGTCAAGAAAAACAGAAACAAGCAGCCAACTTAAATTTAAAGCAGCTGCTTAGCCAGCGGGCGCCACTCAAGCG
CAGCGATATTAAACTGCCTGGGCAACAGCCACCGCCAACCGATACAAGCCCAACCAACCAAGCGATGCCTAACGAGACAT
TACAGTTTTACCAAGCCTTTGGTGTGCGTATTGAAGCCTTTTACCATCAACGAACCGAACCCGATACTCAGCCAAACCTT
TTAGAAACGGCATAA

Upstream 100 bases:

>100_bases
GAGAAATCGATACCAAGCGTTAAGGTGAGTCTGACCATGGCGCTTTATTTTTACGCTGAATTAGGTTAAGATTTAACCAC
ACTTTTCAGCGGGAAATATT

Downstream 100 bases:

>100_bases
AAAAACCGACAAACTCAGTTGTCGGTTTTTTTGTGTCTCGCTTAAACGATTACTTCTTCAATTTCGCGAAGGCATCGGCA
AAAGCGTTACCCATGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLVVTNYPNVPIATSNAATDSARTDSQQRPPIIPPQQATKGHEERAFNPQHERTADHAQNQAKLRESVQQKQQGQSQQQE
QSGQEKQKQAANLNLKQLLSQRAPLKRSDIKLPGQQPPPTDTSPTNQAMPNETLQFYQAFGVRIEAFYHQRTEPDTQPNL
LETA

Sequences:

>Translated_164_residues
MLVVTNYPNVPIATSNAATDSARTDSQQRPPIIPPQQATKGHEERAFNPQHERTADHAQNQAKLRESVQQKQQGQSQQQE
QSGQEKQKQAANLNLKQLLSQRAPLKRSDIKLPGQQPPPTDTSPTNQAMPNETLQFYQAFGVRIEAFYHQRTEPDTQPNL
LETA
>Mature_164_residues
MLVVTNYPNVPIATSNAATDSARTDSQQRPPIIPPQQATKGHEERAFNPQHERTADHAQNQAKLRESVQQKQQGQSQQQE
QSGQEKQKQAANLNLKQLLSQRAPLKRSDIKLPGQQPPPTDTSPTNQAMPNETLQFYQAFGVRIEAFYHQRTEPDTQPNL
LETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18430; Mature: 18430

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVTNYPNVPIATSNAATDSARTDSQQRPPIIPPQQATKGHEERAFNPQHERTADHAQN
CEEECCCCCCCEECCCCCCCCHHCCCCCCCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHH
QAKLRESVQQKQQGQSQQQEQSGQEKQKQAANLNLKQLLSQRAPLKRSDIKLPGQQPPPT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DTSPTNQAMPNETLQFYQAFGVRIEAFYHQRTEPDTQPNLLETA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLVVTNYPNVPIATSNAATDSARTDSQQRPPIIPPQQATKGHEERAFNPQHERTADHAQN
CEEECCCCCCCEECCCCCCCCHHCCCCCCCCCCCCCHHHCCCHHHCCCCCHHHHHHHHHH
QAKLRESVQQKQQGQSQQQEQSGQEKQKQAANLNLKQLLSQRAPLKRSDIKLPGQQPPPT
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DTSPTNQAMPNETLQFYQAFGVRIEAFYHQRTEPDTQPNLLETA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA