Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yeiH [C]

Identifier: 167622105

GI number: 167622105

Start: 190425

End: 191363

Strand: Reverse

Name: yeiH [C]

Synonym: Shal_0164

Alternate gene names: 167622105

Gene position: 191363-190425 (Counterclockwise)

Preceding gene: 167622106

Following gene: 167622096

Centisome position: 3.66

GC content: 49.52

Gene sequence:

>939_bases
ATGACCAACGAAAGCCCAAACAAAATCCATTTAGCTGTGTTTATCTTAGTAGGCTTACTGTGCCTTATGCCGATGGTATC
CTCGCCTGTCGCACTGATCTTGGGTTTTACGCTTGCCAGTATCGGTTGGGCACCCAGCCAGGTACACCTTGGCACCTTAA
CTAAAAAGCTACTCGCCTACTCTATCGTGGGTCTGGGTTTTGGTATTCAGCTAGACGCCGCCGTTAGTATCAGTCTAGAG
AACCTGCCACTGATCCTTGGCTCAATCATTTTCACTCTGATTTTAGGTTTTGCCCTGACCCGTTTGCTAAAGATGGATCA
TAAAACGGGCCACCTTATCGCTTCGGGCACAGCAATTTGTGGTGGCAGCGCCATCGCTGCAGTATCACCTGCAATTAGGG
CCAATAGCGAGCAAACGGCTATCGCACTGGCCACGATATTTATCCTTAATTCCGTGGCACTGTTCCTGTTCCCGGCCATC
GGCCATGCCCTGTCTATGAGTCAGCATGATTTCGGAGTCTGGAGCGCAATAGCCATCCACGACACCTCGTCGGTCGTTGG
CGCAGCCTCGGCTTACGGTAATGAAGCCTTAACCACTGCCACTACCATTAAGCTAGCACGCGCACTGTGGATCATTCCAA
TCGCACTTATCAGCGCCATGCTATTTAAAGGTGACAAGAAGAAGATAGCGATCCCCTACTTTATCGGCTTCTACTGTTTA
GCTATCGTAATGGTCCACTGGCTACCTGCAGGCGAAGTGATTTACAGCGCGATATTTGAGGGGTCTAAGCGACTGTTGGT
GGTGTGTCTGTTCCTGATTGGCGCAGGCATTACCATCCAGAGGATGAAAGCTACGGGTCCTAAGCCACTTATTTTAGGTG
TATTGCTATGGATTGCCATCGGCAGCAGTTCACTAGCGTATATTTTACTGCTTAACTAG

Upstream 100 bases:

>100_bases
TCAGTTTTACTGAAGCTAACAGTAAAGTGTATTTAATTTATTAAAATTTAGCCTACCGCTATAATCAACGGCTGACCTGT
AGCCGTTAATTATTAATCCC

Downstream 100 bases:

>100_bases
CTAGCTATTAATAAACCCATTAAGCAGAGAAAGTTTGATGACTTCGAAAGATAACAATTAACCACAAAGGACACAAAGAG
CATGAAGACAAACAATCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTNESPNKIHLAVFILVGLLCLMPMVSSPVALILGFTLASIGWAPSQVHLGTLTKKLLAYSIVGLGFGIQLDAAVSISLE
NLPLILGSIIFTLILGFALTRLLKMDHKTGHLIASGTAICGGSAIAAVSPAIRANSEQTAIALATIFILNSVALFLFPAI
GHALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKKKIAIPYFIGFYCL
AIVMVHWLPAGEVIYSAIFEGSKRLLVVCLFLIGAGITIQRMKATGPKPLILGVLLWIAIGSSSLAYILLLN

Sequences:

>Translated_312_residues
MTNESPNKIHLAVFILVGLLCLMPMVSSPVALILGFTLASIGWAPSQVHLGTLTKKLLAYSIVGLGFGIQLDAAVSISLE
NLPLILGSIIFTLILGFALTRLLKMDHKTGHLIASGTAICGGSAIAAVSPAIRANSEQTAIALATIFILNSVALFLFPAI
GHALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKKKIAIPYFIGFYCL
AIVMVHWLPAGEVIYSAIFEGSKRLLVVCLFLIGAGITIQRMKATGPKPLILGVLLWIAIGSSSLAYILLLN
>Mature_311_residues
TNESPNKIHLAVFILVGLLCLMPMVSSPVALILGFTLASIGWAPSQVHLGTLTKKLLAYSIVGLGFGIQLDAAVSISLEN
LPLILGSIIFTLILGFALTRLLKMDHKTGHLIASGTAICGGSAIAAVSPAIRANSEQTAIALATIFILNSVALFLFPAIG
HALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKKKIAIPYFIGFYCLA
IVMVHWLPAGEVIYSAIFEGSKRLLVVCLFLIGAGITIQRMKATGPKPLILGVLLWIAIGSSSLAYILLLN

Specific function: Unknown

COG id: COG2855

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0324 family [H]

Homologues:

Organism=Escherichia coli, GI1788482, Length=269, Percent_Identity=27.1375464684015, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018383 [H]

Pfam domain/function: PF03601 Cons_hypoth698 [H]

EC number: NA

Molecular weight: Translated: 32889; Mature: 32758

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNESPNKIHLAVFILVGLLCLMPMVSSPVALILGFTLASIGWAPSQVHLGTLTKKLLAY
CCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SIVGLGFGIQLDAAVSISLENLPLILGSIIFTLILGFALTRLLKMDHKTGHLIASGTAIC
HHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
GGSAIAAVSPAIRANSEQTAIALATIFILNSVALFLFPAIGHALSMSQHDFGVWSAIAIH
CCCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
DTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKKKIAIPYFIGFYCL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
AIVMVHWLPAGEVIYSAIFEGSKRLLVVCLFLIGAGITIQRMKATGPKPLILGVLLWIAI
HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
GSSSLAYILLLN
CCCCEEEEEEEC
>Mature Secondary Structure 
TNESPNKIHLAVFILVGLLCLMPMVSSPVALILGFTLASIGWAPSQVHLGTLTKKLLAY
CCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SIVGLGFGIQLDAAVSISLENLPLILGSIIFTLILGFALTRLLKMDHKTGHLIASGTAIC
HHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
GGSAIAAVSPAIRANSEQTAIALATIFILNSVALFLFPAIGHALSMSQHDFGVWSAIAIH
CCCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
DTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKKKIAIPYFIGFYCL
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
AIVMVHWLPAGEVIYSAIFEGSKRLLVVCLFLIGAGITIQRMKATGPKPLILGVLLWIAI
HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH
GSSSLAYILLLN
CCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]