Click here to switch to the map view.

The map label for this gene is 167622021

Identifier: 167622021

GI number: 167622021

Start: 90860

End: 91600

Strand: Reverse

Name: 167622021

Synonym: Shal_0080

Alternate gene names: NA

Gene position: 91600-90860 (Counterclockwise)

Preceding gene: 167622022

Following gene: 167622020

Centisome position: 1.75

GC content: 38.46

Gene sequence:

>741_bases
ATGGAACTCTCATTATTATTAATGACAGTGTTTTTCGCAGCAACACTACAGGCTGCAACAGGATTCGGATTTGGATTAAT
TGGCGTTAGTATTTTACTTGTTTTATTACAATCTAATTCTGCAGTTCAAATTGTCATTATATTAACCTTAGCCATGTCGC
TAGTTCACTGGATTAAAATCCGTAAAATAGCACCAATGGATTTAGTAAAAAAAATAATGCTCGGCTGTGCCCTCGGCTAC
CCTATCGGCATTATTATATTCAGTAATTTCGACCTTACTGCACTTAAAATTTCTGTCGCTCTACTTATTATTGCGATCAC
GACTCAAAATATCATAGAGATGATTAAATCTCGTAAAGGTCATGAAACTATCCCAGCCAACATGGGTAGAGGTTCATGTT
TTGGTGTCGGTACTATGTCTGGTGTGATGGCAAGTGCAATGGCGATGCCAGGCCCGGTTGTAGTGGCATACCTAACACGT
AGCGTGCTCACTAAAGATCAGATCCGCGCCACAGTGATCACCTGTTCAACTTTTTCTTACATAGTGGCTTTAGGCCTACA
AGCGTCTTTTGTGGGTATTGGAGCAGACACTTTTAAAACATCCATGATGTTAATTCCAGCGACTTTCGCAGGTGCATTTT
TCGGTGATTACATATCTAAGTTTATTAATCAGGAATTATTTAAAAAAATAACACTCTTCGTTTTATTTGGTAGCGGCGTA
AACATCCTACTAAACATATAA

Upstream 100 bases:

>100_bases
ACATTTAGTTATAGCTGATAAATATTTAGTCAATTGACCCAAATAGGGGTCATAAACATATAATCCATCCATAGATTAAA
TATATTATTTTGGTTAACTC

Downstream 100 bases:

>100_bases
GTTACAAAATTAAAGTATAAAAACATAACCAAATACAAAAGCCATTCTTATAAATATTGATACAAGAATAAATTAATATA
AAGGAATCAAAAATGCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MELSLLLMTVFFAATLQAATGFGFGLIGVSILLVLLQSNSAVQIVIILTLAMSLVHWIKIRKIAPMDLVKKIMLGCALGY
PIGIIIFSNFDLTALKISVALLIIAITTQNIIEMIKSRKGHETIPANMGRGSCFGVGTMSGVMASAMAMPGPVVVAYLTR
SVLTKDQIRATVITCSTFSYIVALGLQASFVGIGADTFKTSMMLIPATFAGAFFGDYISKFINQELFKKITLFVLFGSGV
NILLNI

Sequences:

>Translated_246_residues
MELSLLLMTVFFAATLQAATGFGFGLIGVSILLVLLQSNSAVQIVIILTLAMSLVHWIKIRKIAPMDLVKKIMLGCALGY
PIGIIIFSNFDLTALKISVALLIIAITTQNIIEMIKSRKGHETIPANMGRGSCFGVGTMSGVMASAMAMPGPVVVAYLTR
SVLTKDQIRATVITCSTFSYIVALGLQASFVGIGADTFKTSMMLIPATFAGAFFGDYISKFINQELFKKITLFVLFGSGV
NILLNI
>Mature_246_residues
MELSLLLMTVFFAATLQAATGFGFGLIGVSILLVLLQSNSAVQIVIILTLAMSLVHWIKIRKIAPMDLVKKIMLGCALGY
PIGIIIFSNFDLTALKISVALLIIAITTQNIIEMIKSRKGHETIPANMGRGSCFGVGTMSGVMASAMAMPGPVVVAYLTR
SVLTKDQIRATVITCSTFSYIVALGLQASFVGIGADTFKTSMMLIPATFAGAFFGDYISKFINQELFKKITLFVLFGSGV
NILLNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26344; Mature: 26344

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSLLLMTVFFAATLQAATGFGFGLIGVSILLVLLQSNSAVQIVIILTLAMSLVHWIKI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
RKIAPMDLVKKIMLGCALGYPIGIIIFSNFDLTALKISVALLIIAITTQNIIEMIKSRKG
HCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HETIPANMGRGSCFGVGTMSGVMASAMAMPGPVVVAYLTRSVLTKDQIRATVITCSTFSY
CCCCCCCCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHH
IVALGLQASFVGIGADTFKTSMMLIPATFAGAFFGDYISKFINQELFKKITLFVLFGSGV
HHHHCCHHHEEECCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NILLNI
EEEEEC
>Mature Secondary Structure
MELSLLLMTVFFAATLQAATGFGFGLIGVSILLVLLQSNSAVQIVIILTLAMSLVHWIKI
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
RKIAPMDLVKKIMLGCALGYPIGIIIFSNFDLTALKISVALLIIAITTQNIIEMIKSRKG
HCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HETIPANMGRGSCFGVGTMSGVMASAMAMPGPVVVAYLTRSVLTKDQIRATVITCSTFSY
CCCCCCCCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHH
IVALGLQASFVGIGADTFKTSMMLIPATFAGAFFGDYISKFINQELFKKITLFVLFGSGV
HHHHCCHHHEEECCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
NILLNI
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA