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The map label for this gene is yibQ [H]

Identifier: 167621981

GI number: 167621981

Start: 48463

End: 49155

Strand: Reverse

Name: yibQ [H]

Synonym: Shal_0040

Alternate gene names: 167621981

Gene position: 49155-48463 (Counterclockwise)

Preceding gene: 167621982

Following gene: 167621978

Centisome position: 0.94

GC content: 44.88

Gene sequence:

>693_bases
ATGGCCATCATTATTGATGATCTCGGATATCGTCAATCTGATAAGGCGGTGTTGAGTTTGCCCGCCAACATCACTCTTTC
TATATTGCCGCACACGCCATTAGGCCAAAGTCTCGCCCGAGAAGCTTACCTACAAGGGAATGAAGTTTTAGTCCACCTGC
CGATGCAAGCGCTAAATGGCAAGGCTATTGGTCCCGGCGCTTTAACTAACACTATGAGCGAAACAGAGTTGAAGACCCAA
ATAGCAGACTCTATCAATAGCGTACCTAACGCTAGCGGCGCTAATAATCATATGGGAAGTTTGCTGACCCAGCTTAATAG
CCCCATGCGTTGGGTTATGGAGTCGTTGCAGCAGCACAATTTATATTTTATCGATAGCATGACGACCAAATATACTCGAG
CAGGTGCAATAGCGGAGTCAATGGGTGTACCACTATTAAGAAGGGAGATATTTCTAGATAACGATAGATCGCCAGCAGGA
TTAGAAAAACAGTTTAACTATGCTATTTCTTTGGCACACACTAAGCGCAATATTGTGGTCATAGCGCACCCATACCCAGA
AACAATCGAGTTTCTCAATGAGAATCTACACCGTTTGCAGAGTAGTAATATCGACTTGGTGCCCACCTCACAGTTATTAC
CGCAACGTGTAGCCACCAAATCATTAGCAGACCAAGCGTTACTGCAAGATTGA

Upstream 100 bases:

>100_bases
GGCTATAGCATGGATTCAAGCAGAAAAATAATAACCTGTGCGCTACTTTCTATTATTCATCTTTTTATTGTTACCAAGCT
CGAGTGTATTCGCCAGCAAA

Downstream 100 bases:

>100_bases
GATAGACAGATCTGGCAGTAGCGACTTAAGCTCTTGCTTGTTTGTTACTATCATATCTAGAGTATAGGCATCTAGCACAG
CCAAATAAGCATTAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAIIIDDLGYRQSDKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQALNGKAIGPGALTNTMSETELKTQ
IADSINSVPNASGANNHMGSLLTQLNSPMRWVMESLQQHNLYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAG
LEKQFNYAISLAHTKRNIVVIAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQRVATKSLADQALLQD

Sequences:

>Translated_230_residues
MAIIIDDLGYRQSDKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQALNGKAIGPGALTNTMSETELKTQ
IADSINSVPNASGANNHMGSLLTQLNSPMRWVMESLQQHNLYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAG
LEKQFNYAISLAHTKRNIVVIAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQRVATKSLADQALLQD
>Mature_229_residues
AIIIDDLGYRQSDKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQALNGKAIGPGALTNTMSETELKTQI
ADSINSVPNASGANNHMGSLLTQLNSPMRWVMESLQQHNLYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAGL
EKQFNYAISLAHTKRNIVVIAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQRVATKSLADQALLQD

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=214, Percent_Identity=39.2523364485981, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 25307; Mature: 25176

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIIDDLGYRQSDKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQALNG
CEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCC
KAIGPGALTNTMSETELKTQIADSINSVPNASGANNHMGSLLTQLNSPMRWVMESLQQHN
CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
LYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAGLEKQFNYAISLAHTKRNIVV
EEEEECCHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCHHHHHHEEEEEEECCCCEEE
IAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQRVATKSLADQALLQD
EECCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIIIDDLGYRQSDKAVLSLPANITLSILPHTPLGQSLAREAYLQGNEVLVHLPMQALNG
EEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECHHHHCC
KAIGPGALTNTMSETELKTQIADSINSVPNASGANNHMGSLLTQLNSPMRWVMESLQQHN
CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
LYFIDSMTTKYTRAGAIAESMGVPLLRREIFLDNDRSPAGLEKQFNYAISLAHTKRNIVV
EEEEECCHHHHHHHHHHHHHHCCHHHHHHHEECCCCCCCCHHHHHHEEEEEEECCCCEEE
IAHPYPETIEFLNENLHRLQSSNIDLVPTSQLLPQRVATKSLADQALLQD
EECCCHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]