Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is yccU [C]

Identifier: 167040085

GI number: 167040085

Start: 1482363

End: 1482773

Strand: Direct

Name: yccU [C]

Synonym: Teth514_1445

Alternate gene names: 167040085

Gene position: 1482363-1482773 (Clockwise)

Preceding gene: 167040084

Following gene: 167040088

Centisome position: 60.33

GC content: 39.66

Gene sequence:

>411_bases
ATGGAGTGGGATTATTCCTACATAGATTACGTGGAAGAAGCTATGAAAAGAAAGGTGTGGGCTGTAGTAGGAGCACTCCC
TCGAGAGAGTAAATATGGCTATCAAATTTATCGAACTCTTAAATTGAACGGGTATACAGCTTATCCTGTTAATCCAAAAT
TTCAAGAAGTAGATGGAGATCCTTGCTATGAGTCTTTATCGAGCTTACCTGTAATACCAGAAGTTGTAGATATGGTAGTT
CCTCCTAATAGAGGTGGACAGTACCTAGAGGAAGCGGCAAAATTAGGTGTGGAATTTATTTGGTTCCAACCGGGGGCAGA
AAGTGAGGAACTGGTGGAAAAAGCTAAAAACCTTGGGCTAAAAGTTATTTATAATACCTGTGTAATGTTGGAAACCGATA
AGAGGAAGTAA

Upstream 100 bases:

>100_bases
ATATTATGGGACATAAACTTTATCCCTTATAAAAGGAAGAGAGAAAAGTAAATGGGGGCGCATTAATTAAGACCCTATTG
AATTTAGGAGGTTAAAAAGA

Downstream 100 bases:

>100_bases
GAGGAGAGCCATCTCCTCTTATTTGATTATTTGCGAGGTTTTGAGAAAAATTCGTATATTCCCATACAGAATAAAAAAAC
AGCGAATATTTTTTTTAATA

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEWDYSYIDYVEEAMKRKVWAVVGALPRESKYGYQIYRTLKLNGYTAYPVNPKFQEVDGDPCYESLSSLPVIPEVVDMVV
PPNRGGQYLEEAAKLGVEFIWFQPGAESEELVEKAKNLGLKVIYNTCVMLETDKRK

Sequences:

>Translated_136_residues
MEWDYSYIDYVEEAMKRKVWAVVGALPRESKYGYQIYRTLKLNGYTAYPVNPKFQEVDGDPCYESLSSLPVIPEVVDMVV
PPNRGGQYLEEAAKLGVEFIWFQPGAESEELVEKAKNLGLKVIYNTCVMLETDKRK
>Mature_136_residues
MEWDYSYIDYVEEAMKRKVWAVVGALPRESKYGYQIYRTLKLNGYTAYPVNPKFQEVDGDPCYESLSSLPVIPEVVDMVV
PPNRGGQYLEEAAKLGVEFIWFQPGAESEELVEKAKNLGLKVIYNTCVMLETDKRK

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15626; Mature: 15626

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWDYSYIDYVEEAMKRKVWAVVGALPRESKYGYQIYRTLKLNGYTAYPVNPKFQEVDGD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCC
PCYESLSSLPVIPEVVDMVVPPNRGGQYLEEAAKLGVEFIWFQPGAESEELVEKAKNLGL
HHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCE
KVIYNTCVMLETDKRK
EEEEEEEEEEEECCCC
>Mature Secondary Structure
MEWDYSYIDYVEEAMKRKVWAVVGALPRESKYGYQIYRTLKLNGYTAYPVNPKFQEVDGD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCC
PCYESLSSLPVIPEVVDMVVPPNRGGQYLEEAAKLGVEFIWFQPGAESEELVEKAKNLGL
HHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCE
KVIYNTCVMLETDKRK
EEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA