Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
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Accession | NC_010320 |
Length | 2,457,259 |
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The map label for this gene is yvyE [H]
Identifier: 167040084
GI number: 167040084
Start: 1481628
End: 1482278
Strand: Direct
Name: yvyE [H]
Synonym: Teth514_1444
Alternate gene names: 167040084
Gene position: 1481628-1482278 (Clockwise)
Preceding gene: 167040083
Following gene: 167040085
Centisome position: 60.3
GC content: 31.95
Gene sequence:
>651_bases TTGGCTAAAAGTTATAAAACACTATATTCTTACGGAGTTGCTGAAATTGAAATAAAGCGTTCCAAATTTATTGGACATGC TAAACCAGTTTCTTCAGAGGAAGAGGCAATAAAATTTATAGAGGAAATTAGGGCAAGTCACAGAATGGCAACCCATAACG TTTACGCTTATGTTATTGGAGAAAATGATGAAATTCAGCGTTTTAGTGATGATGGAGAGCCTTCTGGCACAGCAGGCATA CCTGTATTAAATGTAATAAAAAAAGAAGGATTAAAAAACGTTGTTGTTGTAGTTACAAGGTATTTTGGCGGAATATTGTT AGGAGCAGGAGGCTTAGTGAGAGCTTATACAAAAGGGGCAAAAGTAGGTATTGATGCTGCTGGAATAATAGAAAAAATAC CTGCGAAAAGTGTTATACTCACTTTTGATTATACTTTCCTGGGAAGAATTCAAAATGAGCTTTTAAAAAAAGGTTATTAC ATTAAGGATATTATATATTCAGATAGAGTTTCTATAGTATTACATATTGAAGAAGACCATCTATTAGAATTTCAAACTTT TATAAATGATTTGACAAGTAAAAGGTGTGATATAAAAATTGAGGAAGATGTATACCTTTTTAAAAAAGGCGATGAATATT ATGGGACATAA
Upstream 100 bases:
>100_bases AGCTTTAATAAAGCCTAATAAAGCCTAATAAAGCCTAATAAAGCCGGCAACGGCTTTATTTTTTGATTATAATTTGGTAT AATGACAAAGGGGTGCTATT
Downstream 100 bases:
>100_bases ACTTTATCCCTTATAAAAGGAAGAGAGAAAAGTAAATGGGGGCGCATTAATTAAGACCCTATTGAATTTAGGAGGTTAAA AAGAATGGAGTGGGATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAKSYKTLYSYGVAEIEIKRSKFIGHAKPVSSEEEAIKFIEEIRASHRMATHNVYAYVIGENDEIQRFSDDGEPSGTAGI PVLNVIKKEGLKNVVVVVTRYFGGILLGAGGLVRAYTKGAKVGIDAAGIIEKIPAKSVILTFDYTFLGRIQNELLKKGYY IKDIIYSDRVSIVLHIEEDHLLEFQTFINDLTSKRCDIKIEEDVYLFKKGDEYYGT
Sequences:
>Translated_216_residues MAKSYKTLYSYGVAEIEIKRSKFIGHAKPVSSEEEAIKFIEEIRASHRMATHNVYAYVIGENDEIQRFSDDGEPSGTAGI PVLNVIKKEGLKNVVVVVTRYFGGILLGAGGLVRAYTKGAKVGIDAAGIIEKIPAKSVILTFDYTFLGRIQNELLKKGYY IKDIIYSDRVSIVLHIEEDHLLEFQTFINDLTSKRCDIKIEEDVYLFKKGDEYYGT >Mature_215_residues AKSYKTLYSYGVAEIEIKRSKFIGHAKPVSSEEEAIKFIEEIRASHRMATHNVYAYVIGENDEIQRFSDDGEPSGTAGIP VLNVIKKEGLKNVVVVVTRYFGGILLGAGGLVRAYTKGAKVGIDAAGIIEKIPAKSVILTFDYTFLGRIQNELLKKGYYI KDIIYSDRVSIVLHIEEDHLLEFQTFINDLTSKRCDIKIEEDVYLFKKGDEYYGT
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=160, Percent_Identity=40.625, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 24286; Mature: 24155
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSYKTLYSYGVAEIEIKRSKFIGHAKPVSSEEEAIKFIEEIRASHRMATHNVYAYVIG CCCCHHHHHHCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEECCEEEEEEC ENDEIQRFSDDGEPSGTAGIPVLNVIKKEGLKNVVVVVTRYFGGILLGAGGLVRAYTKGA CCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCHHHHHHCCC KVGIDAAGIIEKIPAKSVILTFDYTFLGRIQNELLKKGYYIKDIIYSDRVSIVLHIEEDH CCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCH LLEFQTFINDLTSKRCDIKIEEDVYLFKKGDEYYGT HHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCC >Mature Secondary Structure AKSYKTLYSYGVAEIEIKRSKFIGHAKPVSSEEEAIKFIEEIRASHRMATHNVYAYVIG CCCHHHHHHCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEECCEEEEEEC ENDEIQRFSDDGEPSGTAGIPVLNVIKKEGLKNVVVVVTRYFGGILLGAGGLVRAYTKGA CCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCHHHHHHCCC KVGIDAAGIIEKIPAKSVILTFDYTFLGRIQNELLKKGYYIKDIIYSDRVSIVLHIEEDH CCCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCH LLEFQTFINDLTSKRCDIKIEEDVYLFKKGDEYYGT HHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]