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Identifier: 16520051

GI number: 16520051

Start: 69079

End: 69627

Strand: Reverse

Name: Not Available

Synonym: NGR_a00520

Alternate gene names: NA

Gene position: 69627-69079 (Counterclockwise)

Preceding gene: 16520050

Following gene: 16520053

Centisome position: 12.99

GC content: 53.55

Gene sequence:

>549_bases
ATGAATTCACATGAGAATAGAGTCGCCGCGCCGTTGCTTTCATTTCGTTTGAGCTTAGTTCTCTTCGCAGTACTCTCCGT
TCTGCCTCTCGGCGGTTGTGCTAGGTGGGATAACCCCGTTCTTTCAGTGAAGGAGACGTCAGCCGCACAATTGCTCGGCG
CCAACCAAATCAATGCGGCTACGCGCCAACGCATTTTGCGCGCCGTCGGTGAGGACGCTCAAGAGCGGGCTTTGCGGGAT
GATCTGAAGCAGCATCCAGGCAATGTCGATGCGGCAATCCGTCTTACAAAAGCATTGGTGGCGCAGAAACGTCCGCATGA
GGCGCTTCAGGTTTTAGACAACGTCTTGGTCGTGACCCCAGACAATTTGCGTGCATTGAATGCGAAGGCAGTCATCTTGG
ACATTGAGGGGCGGCATGACGCGGCACAAGAGCTGTACCGGCAAGCTCTCGAAACCAACCCAGAGAATCAGATGTTGCAC
CATAACCTCCATCTGTCTCTTGCGTTTGAAGGGAAGTCCGAACAGAGGACTTTGCCACAATCGCGATAA

Upstream 100 bases:

>100_bases
CCCGTCGGATCCATCAGGCTCCCGCCCAGTAATGGAACGTCAGGGGAACCTCGCAGTATCCGCCCTTCTGCCACTACTGG
ATGATAGGTGAGAACCAAAC

Downstream 100 bases:

>100_bases
CGTTGCTGTGATGAATTCACCTTTGAGAAGCAGACGCAGCACGTCGTGCGTGCCTGGGGACGAGGCAGGCCCTATAGCAA
TTGAGCGCTGAACACGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNSHENRVAAPLLSFRLSLVLFAVLSVLPLGGCARWDNPVLSVKETSAAQLLGANQINAATRQRILRAVGEDAQERALRD
DLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTPDNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLH
HNLHLSLAFEGKSEQRTLPQSR

Sequences:

>Translated_182_residues
MNSHENRVAAPLLSFRLSLVLFAVLSVLPLGGCARWDNPVLSVKETSAAQLLGANQINAATRQRILRAVGEDAQERALRD
DLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTPDNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLH
HNLHLSLAFEGKSEQRTLPQSR
>Mature_182_residues
MNSHENRVAAPLLSFRLSLVLFAVLSVLPLGGCARWDNPVLSVKETSAAQLLGANQINAATRQRILRAVGEDAQERALRD
DLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTPDNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLH
HNLHLSLAFEGKSEQRTLPQSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4YS_RHISN (P55727)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444171.1
- ProteinModelPortal:   P55727
- GeneID:   962527
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00520
- HOGENOM:   HBG655985
- ProtClustDB:   CLSK506586
- GO:   GO:0005488
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: PF00515 TPR_1

EC number: NA

Molecular weight: Translated: 20117; Mature: 20117

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xae4d1ec)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHENRVAAPLLSFRLSLVLFAVLSVLPLGGCARWDNPVLSVKETSAAQLLGANQINAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCHHHHH
TRQRILRAVGEDAQERALRDDLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTP
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEECC
DNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLHHNLHLSLAFEGKSEQRTLPQ
CCCEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHEEEECEEEEEEECCCCHHCCCCC
SR
CH
>Mature Secondary Structure
MNSHENRVAAPLLSFRLSLVLFAVLSVLPLGGCARWDNPVLSVKETSAAQLLGANQINAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHCCCHHHHH
TRQRILRAVGEDAQERALRDDLKQHPGNVDAAIRLTKALVAQKRPHEALQVLDNVLVVTP
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCEEEECC
DNLRALNAKAVILDIEGRHDAAQELYRQALETNPENQMLHHNLHLSLAFEGKSEQRTLPQ
CCCEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCHHEEEECEEEEEEECCCCHHCCCCC
SR
CH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424