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Identifier: 16520053

GI number: 16520053

Start: 65976

End: 67046

Strand: Reverse

Name: Not Available

Synonym: NGR_a00500

Alternate gene names: NA

Gene position: 67046-65976 (Counterclockwise)

Preceding gene: 16520051

Following gene: 16520054

Centisome position: 12.5

GC content: 65.55

Gene sequence:

>1071_bases
ATGATCACGACGGGGACGCCTACGACAAGGCGTTCCGCAGCTGGGACTGCTGGTGCTGATCTATGCCCAGTTGAGCGGTG
CGGAGAGCCTGCGCGGCCTGGAGGCCGGCTGGAACGCCAACAGCCATCACCACTATCACCTGGGCAGCGACCGCTTGCCG
ATGCCAACGCCCGCCGCCCGGTTGCCGTCTTTGCCGAGACCTTCGGCCTGCTTGCCGGCCAACTCGACCGACAGACGCGC
CGCGAGGGCCGGGCCATGCTGCGGCTGATCGATTCCACCCCGATCCCGCTCGGCAAGCTGTGCGGCTGGGCCAAGTCGAA
CGGCCGCATCCGCGGCATGAAGATGCATGTCGTCTATGACCCCGACAGCGACTGCCCGCGCCTCCTCGACATCACCGATG
CCAACGTCAACGACGCCCAGATCGGTCGCACCATCGCCATCGAGAGCGGCGCCACCTATATCTTCGACAAGGGCTATTGC
CACTACGGCTGGTGGACGGCGATCGCCGAGGCGAAGGCGTTCTTCGTGACCCGGCCGAAGTCCAACATGGGCCTCAAGGT
GGTGCGCCAACGGCGCATCAAGGTCGCCGAGGGCGACGGCTTCACCGTCATCGACGACGCCACCGTGCGCCTGGCCAGCA
AGGGTGATTCCAAGCTGCCGATCCCGTTGCGCCGCCTCACCGTCAAGCGCGCCGACGGCGACACCATCACGCTGCTGACC
AATGATCGCAAGCGGCCCGCCGTGGCCATCGCGGCGCTCTACAAAGGCCGCTGGCAGATCGAACTCCTGTTCCGCTGGAT
CAAGCAGCACCTCAAGATCCGCAGTTTCCTTGGCAACAACGACAACGCCGTGCGCCTGCAGCTCTTCGCCGCGATGATCG
CCTATGCGCTACTGCGCATCGCGGCGCGCCTTAACCGCATCACCATGCCGATCCTGCGCTTCACCGACTTGGTTATCCGC
TGCCTCTTCGAGCGCCGCGACATCGCCGCCATCGAGCGGCCGCCACCGGTCAATCCCAGCCACAGGAGACCCCGGTGCTC
CCCCCATCAAATGAGCTTCGCCTATGTCTGA

Upstream 100 bases:

>100_bases
TGTCGAGACTCAGAAAGAGGACGGGGCATGCGGTTCACACGTAGCATTCTTGGCAAGCTGATTGAACCGGTCAATCGGCG
CCGCTTCCAGACGATAGTGG

Downstream 100 bases:

>100_bases
ATTTCCCCGGACAGCCCTGCGCCGCGGCGGGAGGATATACGGGCCATCTCAGTGCCCCCAACTTCAGTAACATTCCTGGA
TGAGGCAATAGGGGGGGTCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MITTGTPTTRRSAAGTAGADLCPVERCGEPARPGGRLERQQPSPLSPGQRPLADANARRPVAVFAETFGLLAGQLDRQTR
REGRAMLRLIDSTPIPLGKLCGWAKSNGRIRGMKMHVVYDPDSDCPRLLDITDANVNDAQIGRTIAIESGATYIFDKGYC
HYGWWTAIAEAKAFFVTRPKSNMGLKVVRQRRIKVAEGDGFTVIDDATVRLASKGDSKLPIPLRRLTVKRADGDTITLLT
NDRKRPAVAIAALYKGRWQIELLFRWIKQHLKIRSFLGNNDNAVRLQLFAAMIAYALLRIAARLNRITMPILRFTDLVIR
CLFERRDIAAIERPPPVNPSHRRPRCSPHQMSFAYV

Sequences:

>Translated_356_residues
MITTGTPTTRRSAAGTAGADLCPVERCGEPARPGGRLERQQPSPLSPGQRPLADANARRPVAVFAETFGLLAGQLDRQTR
REGRAMLRLIDSTPIPLGKLCGWAKSNGRIRGMKMHVVYDPDSDCPRLLDITDANVNDAQIGRTIAIESGATYIFDKGYC
HYGWWTAIAEAKAFFVTRPKSNMGLKVVRQRRIKVAEGDGFTVIDDATVRLASKGDSKLPIPLRRLTVKRADGDTITLLT
NDRKRPAVAIAALYKGRWQIELLFRWIKQHLKIRSFLGNNDNAVRLQLFAAMIAYALLRIAARLNRITMPILRFTDLVIR
CLFERRDIAAIERPPPVNPSHRRPRCSPHQMSFAYV
>Mature_356_residues
MITTGTPTTRRSAAGTAGADLCPVERCGEPARPGGRLERQQPSPLSPGQRPLADANARRPVAVFAETFGLLAGQLDRQTR
REGRAMLRLIDSTPIPLGKLCGWAKSNGRIRGMKMHVVYDPDSDCPRLLDITDANVNDAQIGRTIAIESGATYIFDKGYC
HYGWWTAIAEAKAFFVTRPKSNMGLKVVRQRRIKVAEGDGFTVIDDATVRLASKGDSKLPIPLRRLTVKRADGDTITLLT
NDRKRPAVAIAALYKGRWQIELLFRWIKQHLKIRSFLGNNDNAVRLQLFAAMIAYALLRIAARLNRITMPILRFTDLVIR
CLFERRDIAAIERPPPVNPSHRRPRCSPHQMSFAYV

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4ZB_RHISN (P55729)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444173.1
- ProteinModelPortal:   P55729
- GeneID:   962239
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00500
- HOGENOM:   HBG654868
- ProtClustDB:   CLSK514278
- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736
- Gene3D:   G3DSA:3.90.350.10

Pfam domain/function: PF01609 Transposase_11; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 39776; Mature: 39776

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTGTPTTRRSAAGTAGADLCPVERCGEPARPGGRLERQQPSPLSPGQRPLADANARRP
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAVFAETFGLLAGQLDRQTRREGRAMLRLIDSTPIPLGKLCGWAKSNGRIRGMKMHVVYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEEEC
PDSDCPRLLDITDANVNDAQIGRTIAIESGATYIFDKGYCHYGWWTAIAEAKAFFVTRPK
CCCCCCCEEEECCCCCCHHHCCEEEEEECCCEEEEECCCEECHHHHHHHHCCEEEEECCC
SNMGLKVVRQRRIKVAEGDGFTVIDDATVRLASKGDSKLPIPLRRLTVKRADGDTITLLT
CCCCHHHHHHHCEEEECCCCEEEECCCEEEEECCCCCCCCCCHHHEEEEECCCCEEEEEE
NDRKRPAVAIAALYKGRWQIELLFRWIKQHLKIRSFLGNNDNAVRLQLFAAMIAYALLRI
CCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
AARLNRITMPILRFTDLVIRCLFERRDIAAIERPPPVNPSHRRPRCSPHQMSFAYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MITTGTPTTRRSAAGTAGADLCPVERCGEPARPGGRLERQQPSPLSPGQRPLADANARRP
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAVFAETFGLLAGQLDRQTRREGRAMLRLIDSTPIPLGKLCGWAKSNGRIRGMKMHVVYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEEEC
PDSDCPRLLDITDANVNDAQIGRTIAIESGATYIFDKGYCHYGWWTAIAEAKAFFVTRPK
CCCCCCCEEEECCCCCCHHHCCEEEEEECCCEEEEECCCEECHHHHHHHHCCEEEEECCC
SNMGLKVVRQRRIKVAEGDGFTVIDDATVRLASKGDSKLPIPLRRLTVKRADGDTITLLT
CCCCHHHHHHHCEEEECCCCEEEECCCEEEEECCCCCCCCCCHHHEEEEECCCCEEEEEE
NDRKRPAVAIAALYKGRWQIELLFRWIKQHLKIRSFLGNNDNAVRLQLFAAMIAYALLRI
CCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
AARLNRITMPILRFTDLVIRCLFERRDIAAIERPPPVNPSHRRPRCSPHQMSFAYV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424