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The map label for this gene is nopL

Identifier: 16520028

GI number: 16520028

Start: 94637

End: 95653

Strand: Direct

Name: nopL

Synonym: NGR_a00770

Alternate gene names: 16520028

Gene position: 94637-95653 (Clockwise)

Preceding gene: 16520029

Following gene: 16520024

Centisome position: 17.65

GC content: 59.39

Gene sequence:

>1017_bases
ATGGATATCAATTCAACCAGCCCACTAAACGCAAGCCCACAGCCGGACTCTCCACCACCCGCCAACGCGAGTGCATTTGC
GCATCAGCTGAGCGGATTTCAATATAGCCCTCCACATGCCGCTGACTCACTATTGCCGCAGGTTGAAGCCGATTCCCCAT
ATTTGGACACCAGGCATCCCTACTCGCAGTATTTGGATTCGGCATATCCTTATCCATCACCTTGTGAATGGCAGCATGAC
CTGTATACCAGGACTAGGGAAAGGTCTCCCCATCCTAGCGAGCAGCGACCGCATGCTCGGGTGCTACAGGGCGCGCCCGA
ACACGACCAGGATCAGCACCTGGAAGCCGCGGGACCGCGAGAAGGATCATGGCAAGTGGGGCCATCACGATCTGGACCGT
CGCAAGCCGGGCTATCCCCGTCCGCCACCCCACTGAACCCAAGCCCACCGCCGCATGCCACCGACTTAGAAACCAAGCAT
CCCTACTCGCAGTATTTGGATTGGGCGAATCCGTCATTGCTTGATTGGCAGCAGGACCTGCATACGCGGGCTACAGCTTC
TCCCGCGCCACTGACCGCTGAGAGGGGAAGGTCTCCCCAGCCTAGCGAGCAGCAACCGCATGCTCGCGCGCTGCAGGTGC
CCGAATACGATCAGGATTTGATATGGCAGCGCGTGGATGCCGCGGGGCCGCAAGCTGGACCGTGGCAGGTGGGACCATCA
CACTCTGGACCGTCGCAAGCCCGGCCATCGCACGCTTGGCCGTCCTCGTCCGCAGGGGCCGAGCCGGCTGAACTTTCTGA
TTTCGTTATGGATAGCGGCGTTCGTGCGTGGGACCACTGGTTCTTAGCTCCTCACATGGCCTCAGAAGACCAGATGAGCA
TGCTGAGGGCCACGGGGCTAATGCCAACCGCAGAGGTCCCGACAACAACGTTTTTGATGATGGGCATGCGGCACGTTGCC
GAATTCCGAGGCGAGGGAGTCATTCGCATCAGGCCATCGGTGGATTTTGACATTTGA

Upstream 100 bases:

>100_bases
CGAAAGGTATGTCTCTTAACAATTGCAGGGCGGATTAGATGGTGATGCCGCCTCCGCATCGGAAAGGCTTGGGGCCTCCA
TATTTCAAAGGAGAAACAGG

Downstream 100 bases:

>100_bases
TCTGCGGACTCGGGTGCGGGCTTTCCTGCAGAGTAGGCGTTCACGATCGAAGCGCACAGCGTATGCCCTGAAAGGGGCAG
GAATTCTTAGCACCCCCGTC

Product: nodulation protein NopL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDINSTSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHPYSQYLDSAYPYPSPCEWQHD
LYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPREGSWQVGPSRSGPSQAGLSPSATPLNPSPPPHATDLETKH
PYSQYLDWANPSLLDWQQDLHTRATASPAPLTAERGRSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPS
HSGPSQARPSHAWPSSSAGAEPAELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGLMPTAEVPTTTFLMMGMRHVA
EFRGEGVIRIRPSVDFDI

Sequences:

>Translated_338_residues
MDINSTSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHPYSQYLDSAYPYPSPCEWQHD
LYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPREGSWQVGPSRSGPSQAGLSPSATPLNPSPPPHATDLETKH
PYSQYLDWANPSLLDWQQDLHTRATASPAPLTAERGRSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPS
HSGPSQARPSHAWPSSSAGAEPAELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGLMPTAEVPTTTFLMMGMRHVA
EFRGEGVIRIRPSVDFDI
>Mature_338_residues
MDINSTSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHPYSQYLDSAYPYPSPCEWQHD
LYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPREGSWQVGPSRSGPSQAGLSPSATPLNPSPPPHATDLETKH
PYSQYLDWANPSLLDWQQDLHTRATASPAPLTAERGRSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPS
HSGPSQARPSHAWPSSSAGAEPAELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGLMPTAEVPTTTFLMMGMRHVA
EFRGEGVIRIRPSVDFDI

Specific function: Putative symbiotic effector that modulates nodulation in legumes. When delivered into the plant cell, modulates the activity of signal transduction pathways that culminate in activation of PR proteins

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted by the type II secretion system and delivered into the host plant cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOPL_RHISN (P55704)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444148.1
- GeneID:   962508
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00770
- ProtClustDB:   CLSK516134
- GO:   GO:0009877

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37145; Mature: 37145

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINSTSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
YSQYLDSAYPYPSPCEWQHDLYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPR
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
EGSWQVGPSRSGPSQAGLSPSATPLNPSPPPHATDLETKHPYSQYLDWANPSLLDWQQDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH
HTRATASPAPLTAERGRSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPS
HHHHCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
HSGPSQARPSHAWPSSSAGAEPAELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCC
MPTAEVPTTTFLMMGMRHVAEFRGEGVIRIRPSVDFDI
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
>Mature Secondary Structure
MDINSTSPLNASPQPDSPPPANASAFAHQLSGFQYSPPHAADSLLPQVEADSPYLDTRHP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
YSQYLDSAYPYPSPCEWQHDLYTRTRERSPHPSEQRPHARVLQGAPEHDQDQHLEAAGPR
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
EGSWQVGPSRSGPSQAGLSPSATPLNPSPPPHATDLETKHPYSQYLDWANPSLLDWQQDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHH
HTRATASPAPLTAERGRSPQPSEQQPHARALQVPEYDQDLIWQRVDAAGPQAGPWQVGPS
HHHHCCCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
HSGPSQARPSHAWPSSSAGAEPAELSDFVMDSGVRAWDHWFLAPHMASEDQMSMLRATGL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCC
MPTAEVPTTTFLMMGMRHVAEFRGEGVIRIRPSVDFDI
CCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424