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The map label for this gene is ttsI

Identifier: 16520025

GI number: 16520025

Start: 98120

End: 98800

Strand: Reverse

Name: ttsI

Synonym: NGR_a00800

Alternate gene names: 16520025

Gene position: 98800-98120 (Counterclockwise)

Preceding gene: 16520023

Following gene: 16520026

Centisome position: 18.43

GC content: 55.65

Gene sequence:

>681_bases
ATGCGAACGTTGCTCGTGGATACGGATCTTACCCGCGCGGTCCGAGGCGCGCTCGGTGACGGCGGCTTTGCCGTTGATGT
AGTTGGCACGCTGGAACAGGCGTCGAGCGCATTTTTTTCAGCGAGCTATGAAATTCTCCTGCTGGAGTTGGTACTGCCAG
ATGGCGATGGACTGGATTGGCTGAGGCAGCTAAGGAGCGACGGGTATTCAGTTCCTGCCGTCATTATGAGCAGGCTCGAC
GATCTCGAGAAACGAATTTCGGTATTCAATAGTGGCGCGGACGATTTTCTCCGTAAACCCGTCTCTACGGATGAGCTCAT
CGCCAGAATGCGGGCCCTTCTGCGCCGATCGACACAGATCACTTGCCCCATCATTGAATTTGGCAACCTCCACTTCGATC
CGATCGGCCGACAGGTGTCGGTTGACGGTCATCCGCTAATGATCGCACGTCGCGAACTATGCATTCTAGAGCATCTGCTT
AACCGCGCAGGTCGCATCGTGCCGCGTGCGCGGTTGGAAGATCAACTCTATTCGTTCAACGACGAAGTTTCAGGCAACGC
GCTTGAAGCCGGAATCTACCGCTTACGCGGGTATCTCAGTAGGTCAGGTGCCACGTTGCGGATCAGGACCGTGCGCGGCA
TTGGCTACACTCTTGAATTGACTGACGCGTCATCAGCATAG

Upstream 100 bases:

>100_bases
GGTACGAAAACTGCGATCAGTCGCGCGGTACTGCTGTCACCCCGGTCATAGTCCGCGGTGACGTGCTCAATTGGCTGTCC
TGCCTTGATAGGAGAATGAA

Downstream 100 bases:

>100_bases
TCGAATTTGAAGGAAGGACTGCCTTGAAAGCCACTCCAACTGGTCATGCTAGCGCCGATCGATGGCCGACCCCCATCGTC
GGTTCAAGGCCAACTGTTCC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDWLRQLRSDGYSVPAVIMSRLD
DLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQITCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLL
NRAGRIVPRARLEDQLYSFNDEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYTLELTDASSA

Sequences:

>Translated_226_residues
MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDWLRQLRSDGYSVPAVIMSRLD
DLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQITCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLL
NRAGRIVPRARLEDQLYSFNDEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYTLELTDASSA
>Mature_226_residues
MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDWLRQLRSDGYSVPAVIMSRLD
DLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQITCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLL
NRAGRIVPRARLEDQLYSFNDEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYTLELTDASSA

Specific function: Probable Member Of A Two-Component Regulatory System Ygix/Ygiy. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=37.2727272727273, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=37.2727272727273, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786784, Length=209, Percent_Identity=31.5789473684211, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=28.8288288288288, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=29.0909090909091, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786599, Length=203, Percent_Identity=27.5862068965517, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1786911, Length=212, Percent_Identity=30.6603773584906, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1790860, Length=208, Percent_Identity=29.8076923076923, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=29.2372881355932, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=29.8245614035088, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI145693140, Length=198, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788394, Length=206, Percent_Identity=27.6699029126214, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y4XI_RHISN (P55701)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444145.1
- ProteinModelPortal:   P55701
- SMR:   P55701
- GeneID:   962506
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00800
- HOGENOM:   HBG753323
- ProtClustDB:   CLSK506569
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00448
- SMART:   SM00862

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 25025; Mature: 25025

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDW
CCEEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHH
LRQLRSDGYSVPAVIMSRLDDLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCE
TCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLLNRAGRIVPRARLEDQLYSFN
EEEEEECCCEEECCCCCEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
DEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYTLELTDASSA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCC
>Mature Secondary Structure
MRTLLVDTDLTRAVRGALGDGGFAVDVVGTLEQASSAFFSASYEILLLELVLPDGDGLDW
CCEEEECCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHH
LRQLRSDGYSVPAVIMSRLDDLEKRISVFNSGADDFLRKPVSTDELIARMRALLRRSTQI
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCE
TCPIIEFGNLHFDPIGRQVSVDGHPLMIARRELCILEHLLNRAGRIVPRARLEDQLYSFN
EEEEEECCCEEECCCCCEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
DEVSGNALEAGIYRLRGYLSRSGATLRIRTVRGIGYTLELTDASSA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424