Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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The map label for this gene is Not Available

Identifier: 16520023

GI number: 16520023

Start: 101570

End: 103087

Strand: Reverse

Name: Not Available

Synonym: NGR_a00820

Alternate gene names: NA

Gene position: 103087-101570 (Counterclockwise)

Preceding gene: 16520022

Following gene: 16520025

Centisome position: 19.23

GC content: 56.13

Gene sequence:

>1518_bases
GTGATGCTGGATCTGACGAATGCGAAGCGCATAGGAATCATCGGCGGCGGCATTGTCGGTTGGCTTGCAGCGATAGCGCT
TCGCCGTGTTTTCGACGTTGATGTCGATGTAACGGTCATAGAGGCTCCGACGGTGTTTCCGCTTGGCCCAGGGGAGGGGG
GCTCGCTCAACCTGATTGACACGTTGTGTCGCAATGAGCTCGACCTGGACGTTTTCATTGGTGAAGCCGGCGCCACCCAC
AAGCTTGGTGTGCTCTATGAAAATTGGAGGGGTGGAGGAATCCCGGATCGCTACTACCGCATGTTCGGCGGATCGGGCAT
ACCGGAAATCGAATGTCGCGTCGGCGGTTTCTTCCCTCTGCTGTCGGCGAGAATTGCCGCAGGTGAGAACCTTCACACGT
GCATCCCTGGCTTTGAGTTAATCACAAAGAAGGCATCGCAAGTGGAAATCGACGAGTTGCTGGCAACCGGTGAGTCTGGA
CTCTACCCTTCGTTTCACTTCAATCACGCCGGCTTCGAGCGATACCTAAGGCGCGTCGGGCTGGCACGTGGGATCACTTC
TCGTAGGGCTGTGGTACACGGGATGAGACTCGACGACCGAGGGCATGTAAACGCTTTCCAGCTCGGAGGCGAAGAACTTG
AAGTCGACTTCGCCGTCGATGCGTCCGGATTTGCCAGATTGGGTCTCGGCAAAGTCTTTAATACGCGCTGGTGTTCGTTC
GCAAATGTGCTGCCTACTGATCGTGCGATCATCTTTGAGCTTGAGCCGCGGGGATCATCCCCCGTTACCCGTGCCACCGC
CATGAAAGCCGGATGGATGTGGGAAGCCCCATTGAATCGCTCGATCAGTGCCGGTTATGCATTCAGCAGCAGATATGCGG
ACGCTGCGATGGCAATCGCCGAGGTTGAGAATCACTATGGATTCCGTGTGGAGGCGAAACACGAGCTTTCGCTGGATCAA
GGTTACTTTTCGACCGCATGGGTTAACAATTTCGTGGCTTTGGGAACAGCGTCGGGTTTTGTTGAGCCCCTGGAGGCTGC
ACTTGCCGCCCACACCTTCGAAGCGTTAAGGAATTTGGAGCGCATTCTCGCCAACGGAAGCGGCATTGTGCCCGCTCGGG
CCATCGAAGGCTATAACAGCGCAAACGCACGGTGCTGGACGGGTGTTCGGGACTTCCTGAGGCTGCACTACGATTCCAAG
CGAATTGACACACCGTTTTGGCGAGATCTTGCCGCAGCCGAGTTGCCGGAAGGATATGCCAACCTGAGGGCTTGCTTCCA
AAAACGGACACCACGCTTTATCGATATCCAACCGTATGTCGGAAGCGGATGGCAGAGCCTCTTCCACGAAATTGATTGGA
TTTCAGTGGCGGTCCCTCTAGGAGTAGTGCCGCAGGCGGCCGCATGCGCCGAACTACGCAGGCTCTCTACGGAAAGTCGA
AGTGAGGTCCAGGCCTATGTTGATCGGCTGAAGGGAACAATAGCCAAGATCAGCAGCACGAGGGGATACATGCACTAA

Upstream 100 bases:

>100_bases
TGGGGAATGCTACCGCTTCAGATGGTCCTACATTGAATCTTACTGTGGGTTCTCCCTACAGATGCGCCACCTTTTAACAT
AATCTTGACGATAGTGAAAA

Downstream 100 bases:

>100_bases
TCGTCACACAAAAGCCACTCCGCGGCCGAAGCCGTGTACCAGGGTCTTGCTTCATGATCATGGCGGAGCGGCACATTGAT
CGTGAGCAGGGTGTCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MMLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLIDTLCRNELDLDVFIGEAGATH
KLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPLLSARIAAGENLHTCIPGFELITKKASQVEIDELLATGESG
LYPSFHFNHAGFERYLRRVGLARGITSRRAVVHGMRLDDRGHVNAFQLGGEELEVDFAVDASGFARLGLGKVFNTRWCSF
ANVLPTDRAIIFELEPRGSSPVTRATAMKAGWMWEAPLNRSISAGYAFSSRYADAAMAIAEVENHYGFRVEAKHELSLDQ
GYFSTAWVNNFVALGTASGFVEPLEAALAAHTFEALRNLERILANGSGIVPARAIEGYNSANARCWTGVRDFLRLHYDSK
RIDTPFWRDLAAAELPEGYANLRACFQKRTPRFIDIQPYVGSGWQSLFHEIDWISVAVPLGVVPQAAACAELRRLSTESR
SEVQAYVDRLKGTIAKISSTRGYMH

Sequences:

>Translated_505_residues
MMLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLIDTLCRNELDLDVFIGEAGATH
KLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPLLSARIAAGENLHTCIPGFELITKKASQVEIDELLATGESG
LYPSFHFNHAGFERYLRRVGLARGITSRRAVVHGMRLDDRGHVNAFQLGGEELEVDFAVDASGFARLGLGKVFNTRWCSF
ANVLPTDRAIIFELEPRGSSPVTRATAMKAGWMWEAPLNRSISAGYAFSSRYADAAMAIAEVENHYGFRVEAKHELSLDQ
GYFSTAWVNNFVALGTASGFVEPLEAALAAHTFEALRNLERILANGSGIVPARAIEGYNSANARCWTGVRDFLRLHYDSK
RIDTPFWRDLAAAELPEGYANLRACFQKRTPRFIDIQPYVGSGWQSLFHEIDWISVAVPLGVVPQAAACAELRRLSTESR
SEVQAYVDRLKGTIAKISSTRGYMH
>Mature_505_residues
MMLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLIDTLCRNELDLDVFIGEAGATH
KLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPLLSARIAAGENLHTCIPGFELITKKASQVEIDELLATGESG
LYPSFHFNHAGFERYLRRVGLARGITSRRAVVHGMRLDDRGHVNAFQLGGEELEVDFAVDASGFARLGLGKVFNTRWCSF
ANVLPTDRAIIFELEPRGSSPVTRATAMKAGWMWEAPLNRSISAGYAFSSRYADAAMAIAEVENHYGFRVEAKHELSLDQ
GYFSTAWVNNFVALGTASGFVEPLEAALAAHTFEALRNLERILANGSGIVPARAIEGYNSANARCWTGVRDFLRLHYDSK
RIDTPFWRDLAAAELPEGYANLRACFQKRTPRFIDIQPYVGSGWQSLFHEIDWISVAVPLGVVPQAAACAELRRLSTESR
SEVQAYVDRLKGTIAKISSTRGYMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4XG_RHISN (P55699)

Other databases:

- EMBL:   U00090
- PIR:   T10835
- RefSeq:   NP_444143.1
- ProteinModelPortal:   P55699
- SMR:   P55699
- GeneID:   962507
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00820
- InterPro:   IPR006905

Pfam domain/function: PF04820 Trp_halogenase

EC number: NA

Molecular weight: Translated: 55457; Mature: 55457

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb36cc9c)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLID
CEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCHHHH
TLCRNELDLDVFIGEAGATHKLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPL
HHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHH
LSARIAAGENLHTCIPGFELITKKASQVEIDELLATGESGLYPSFHFNHAGFERYLRRVG
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LARGITSRRAVVHGMRLDDRGHVNAFQLGGEELEVDFAVDASGFARLGLGKVFNTRWCSF
HHHCCHHHHHHHCCCEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
ANVLPTDRAIIFELEPRGSSPVTRATAMKAGWMWEAPLNRSISAGYAFSSRYADAAMAIA
HCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
EVENHYGFRVEAKHELSLDQGYFSTAWVNNFVALGTASGFVEPLEAALAAHTFEALRNLE
HHHHCCCEEEEECCCCCCCCCCCHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RILANGSGIVPARAIEGYNSANARCWTGVRDFLRLHYDSKRIDTPFWRDLAAAELPEGYA
HHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
NLRACFQKRTPRFIDIQPYVGSGWQSLFHEIDWISVAVPLGVVPQAAACAELRRLSTESR
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHCCCHH
SEVQAYVDRLKGTIAKISSTRGYMH
HHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MMLDLTNAKRIGIIGGGIVGWLAAIALRRVFDVDVDVTVIEAPTVFPLGPGEGGSLNLID
CEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCHHHH
TLCRNELDLDVFIGEAGATHKLGVLYENWRGGGIPDRYYRMFGGSGIPEIECRVGGFFPL
HHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEECCCHHHH
LSARIAAGENLHTCIPGFELITKKASQVEIDELLATGESGLYPSFHFNHAGFERYLRRVG
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LARGITSRRAVVHGMRLDDRGHVNAFQLGGEELEVDFAVDASGFARLGLGKVFNTRWCSF
HHHCCHHHHHHHCCCEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHH
ANVLPTDRAIIFELEPRGSSPVTRATAMKAGWMWEAPLNRSISAGYAFSSRYADAAMAIA
HCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHH
EVENHYGFRVEAKHELSLDQGYFSTAWVNNFVALGTASGFVEPLEAALAAHTFEALRNLE
HHHHCCCEEEEECCCCCCCCCCCHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RILANGSGIVPARAIEGYNSANARCWTGVRDFLRLHYDSKRIDTPFWRDLAAAELPEGYA
HHHHCCCCCCCHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
NLRACFQKRTPRFIDIQPYVGSGWQSLFHEIDWISVAVPLGVVPQAAACAELRRLSTESR
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHCCCHH
SEVQAYVDRLKGTIAKISSTRGYMH
HHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424