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Identifier: 16519973

GI number: 16519973

Start: 161813

End: 162559

Strand: Direct

Name: Not Available

Synonym: NGR_a01320

Alternate gene names: 16519973

Gene position: 161813-162559 (Clockwise)

Preceding gene: 16519974

Following gene: 16519970

Centisome position: 30.18

GC content: 58.5

Gene sequence:

>747_bases
ATGCTCAAACATCCTACCCTCAACCTGCTGCAGCAATTGGGGCTTGCCGGTATGGCAGACGCCTTCACAAGACTGGCCGA
TAATGACGAGAGCGACAACCTCAGTCATGGCGAATGGCTGGCGCTGCTCTTGGATCAGGAAGCCACCTGGCGCAACAACA
AGCGTCTTGCGCTCCGACTTCGTAACGCGAAACTGCACCATCCCGCTGTTCCCGAAGATATCATTCGCCGTGCACCGCGC
GAATACGATCGCACCATCCTCGACCTGCTGATTGCCGGCGACTGGATCAGAAAACACGAGAACTGTGCCATTGTCGGCCC
GACCGGCATCGGGAAAAGCTGGTTGGCCTGTGCCTTGGGACACAAGGCCTGCCGCGACAATCATTCGGTCCTTTACGTCC
GGATGCCGGCATTGCTGCAGAGCCTGGAACAGGCCCGCGGTATCGGCAGCCTCGCAACGCGCCTGAAAAGTCTCGGCGCC
GTCGAACTTCTCATCCTCGATGATTACGGGCTTCAGCCCATCGACGGTAATGCTCCCCATTATCTGCTCGAGATCCTTGA
GGGACGATACGGCCGACGCTCGACGCTCGTCACCAGCCAATTCCCCGTAGCCCGATGGCACGAAAAAATCAGCGACCCCA
CCTATGCCGACGCAATATTGGATCGCCTGGTTCACAACGCTCACAGGCTTGAAATGAGCGGCGAATCGATGCGTCGGCTG
CGTCAACCGGCCGAAATCCAGACCTGA

Upstream 100 bases:

>100_bases
AGGAACTCGACCGCCTCCCAAGGTCCGAGCGCCTCGAGCAGGAACCGATCCAGCATTCCAACCTCCGCGGCTCCGAATAC
TACCATTGAAAGGAATAAAA

Downstream 100 bases:

>100_bases
AAGGCCGGACCCCAAACCCGTGGACAATATCCTGGCCAAAAGAATGTCGGACACGCCGCCCGCGAAGCAGACCGGCCCCT
ACGGCGCGTTGGGAAGCGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLKHPTLNLLQQLGLAGMADAFTRLADNDESDNLSHGEWLALLLDQEATWRNNKRLALRLRNAKLHHPAVPEDIIRRAPR
EYDRTILDLLIAGDWIRKHENCAIVGPTGIGKSWLACALGHKACRDNHSVLYVRMPALLQSLEQARGIGSLATRLKSLGA
VELLILDDYGLQPIDGNAPHYLLEILEGRYGRRSTLVTSQFPVARWHEKISDPTYADAILDRLVHNAHRLEMSGESMRRL
RQPAEIQT

Sequences:

>Translated_248_residues
MLKHPTLNLLQQLGLAGMADAFTRLADNDESDNLSHGEWLALLLDQEATWRNNKRLALRLRNAKLHHPAVPEDIIRRAPR
EYDRTILDLLIAGDWIRKHENCAIVGPTGIGKSWLACALGHKACRDNHSVLYVRMPALLQSLEQARGIGSLATRLKSLGA
VELLILDDYGLQPIDGNAPHYLLEILEGRYGRRSTLVTSQFPVARWHEKISDPTYADAILDRLVHNAHRLEMSGESMRRL
RQPAEIQT
>Mature_248_residues
MLKHPTLNLLQQLGLAGMADAFTRLADNDESDNLSHGEWLALLLDQEATWRNNKRLALRLRNAKLHHPAVPEDIIRRAPR
EYDRTILDLLIAGDWIRKHENCAIVGPTGIGKSWLACALGHKACRDNHSVLYVRMPALLQSLEQARGIGSLATRLKSLGA
VELLILDDYGLQPIDGNAPHYLLEILEGRYGRRSTLVTSQFPVARWHEKISDPTYADAILDRLVHNAHRLEMSGESMRRL
RQPAEIQT

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4UH_RHISN (Q53200)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444093.1
- ProteinModelPortal:   Q53200
- SMR:   Q53200
- GeneID:   962568
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01320
- HOGENOM:   HBG695266
- InterPro:   IPR003593
- InterPro:   IPR002611
- InterPro:   IPR013690
- SMART:   SM00382

Pfam domain/function: PF01695 IstB; PF08483 IstB_N

EC number: NA

Molecular weight: Translated: 27976; Mature: 27976

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHPTLNLLQQLGLAGMADAFTRLADNDESDNLSHGEWLALLLDQEATWRNNKRLALRL
CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
RNAKLHHPAVPEDIIRRAPREYDRTILDLLIAGDWIRKHENCAIVGPTGIGKSWLACALG
ECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
HKACRDNHSVLYVRMPALLQSLEQARGIGSLATRLKSLGAVELLILDDYGLQPIDGNAPH
HHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
YLLEILEGRYGRRSTLVTSQFPVARWHEKISDPTYADAILDRLVHNAHRLEMSGESMRRL
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RQPAEIQT
CCCCCCCC
>Mature Secondary Structure
MLKHPTLNLLQQLGLAGMADAFTRLADNDESDNLSHGEWLALLLDQEATWRNNKRLALRL
CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEE
RNAKLHHPAVPEDIIRRAPREYDRTILDLLIAGDWIRKHENCAIVGPTGIGKSWLACALG
ECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
HKACRDNHSVLYVRMPALLQSLEQARGIGSLATRLKSLGAVELLILDDYGLQPIDGNAPH
HHHHCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH
YLLEILEGRYGRRSTLVTSQFPVARWHEKISDPTYADAILDRLVHNAHRLEMSGESMRRL
HHHHHHHCCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
RQPAEIQT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424