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Identifier: 16519970

GI number: 16519970

Start: 165069

End: 166148

Strand: Direct

Name: Not Available

Synonym: NGR_a01350

Alternate gene names: NA

Gene position: 165069-166148 (Clockwise)

Preceding gene: 16519973

Following gene: 16519819

Centisome position: 30.79

GC content: 64.63

Gene sequence:

>1080_bases
ATGGGCGACGGCCCGAATTGGCGTAGCCTTCCTGAACCGAGCCGATTCGTCGGGAGCGACCCATCGCCCCCTGTGCCTCG
AGCACCTGGGGGGGACACGTGCCCCGTCGGATTGGCCGTGATCGATGCCCCGTGGGGAGTTCGCGCCGGACCTGTGCTTT
TCCGAGCGCCAGTACAGGGATCGGCGAAGATCGCGGTGGCTCGTATGCTCGAACGGGGAGAAGGCATGACTGATCAAAGA
CATTGTTATGCTGGCGTCGACTGGGCGTCGGAGAGCCATCATGTGTTCCTCACGGACGGTGATGGCCGAAAAATCGGCGA
AAGGGTCTTCAGGCACGGCGGCGAAGGGCTCGCCGAAATGGCGGCCTGGCTGATGGCGACGAGCGGCGCGGTTGAGGGGG
ACGAAATCCAGGTCGCAATCGAGGTGCCGCACGGCCCCGTGGTCGAGACGCTGATTGAGCGCGGGTTCAAGGTGAATGCC
ATTAATCCAAAGCAAATGGATCGTTTCCGCGACCGCTTCACCATGGCCGGTGCCAAGGACGACAGCCGCGATGCCGAGGT
GATGGCTTCCGCCCTGCGCACCGATCCGCGTTGCTTTCGGCTGCTCGCGGTCTCCGACCCCGTCGTCATCGAATTGCGCG
AGTGGTCGCGCATCGCCGAAGACCTCAGCGCCGAGCGCAACCGTTTGACGAACCGTATGCGCGAGCAGCTCTGGCGCTAC
TTCCCCGCACTGCTTGAGCTCGAAAACGACCTCGGGGCAGAGTGGTTGCTCGATCTCTGGGACACCGTGCCGACGCCGGA
CAAAGCCGCGCGCATCCGCGAGGCGACGATCGCCAAGCTTCTCAAGCGCCATCGCATCCGCCGCTTCGACGCCCCCCCAT
GTGCTCGATATATTGCGCCAGCCGCCGCTCAAGGTCGCCGCCGGAACGACCGAATCCGCCAGCGCCCACGTCACTACGCT
CATTGCCCGCATCCGCCTCGTCAACCGGCAGCTCAAACAGGCGCATCATCGGCTGGATGGCCTGACCGCCAGCCTCATCG
CAACCGCGCAGGTGGAGCCGGGGCAGAAGAAGCAGCATGA

Upstream 100 bases:

>100_bases
CTGATGGACGCTGACCAACCCCCTGTACCCTTCTCATGCGGTTCTTGGATGCTCGACGTGGGTCGCGCGACGTGAAGCGT
GGCGGAACGTGGCGTGCACC

Downstream 100 bases:

>100_bases
CGTGGAGATCCTCGCATCCTTGCCGGGAGTGGGAAGGGTTGTCCTCGCCACGCTGCTCGCAGAAGCGTTCGATGCCCTGC
AGCGACGTGACGACGCCGCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGDGPNWRSLPEPSRFVGSDPSPPVPRAPGGDTCPVGLAVIDAPWGVRAGPVLFRAPVQGSAKIAVARMLERGEGMTDQR
HCYAGVDWASESHHVFLTDGDGRKIGERVFRHGGEGLAEMAAWLMATSGAVEGDEIQVAIEVPHGPVVETLIERGFKVNA
INPKQMDRFRDRFTMAGAKDDSRDAEVMASALRTDPRCFRLLAVSDPVVIELREWSRIAEDLSAERNRLTNRMREQLWRY
FPALLELENDLGAEWLLDLWDTVPTPDKAARIREATIAKLLKRHRIRRFDAPPCARYIAPAAAQGRRRNDRIRQRPRHYA
HCPHPPRQPAAQTGASSAGWPDRQPHRNRAGGAGAEEAA

Sequences:

>Translated_359_residues
MGDGPNWRSLPEPSRFVGSDPSPPVPRAPGGDTCPVGLAVIDAPWGVRAGPVLFRAPVQGSAKIAVARMLERGEGMTDQR
HCYAGVDWASESHHVFLTDGDGRKIGERVFRHGGEGLAEMAAWLMATSGAVEGDEIQVAIEVPHGPVVETLIERGFKVNA
INPKQMDRFRDRFTMAGAKDDSRDAEVMASALRTDPRCFRLLAVSDPVVIELREWSRIAEDLSAERNRLTNRMREQLWRY
FPALLELENDLGAEWLLDLWDTVPTPDKAARIREATIAKLLKRHRIRRFDAPPCARYIAPAAAQGRRRNDRIRQRPRHYA
HCPHPPRQPAAQTGASSAGWPDRQPHRNRAGGAGAEEAA
>Mature_358_residues
GDGPNWRSLPEPSRFVGSDPSPPVPRAPGGDTCPVGLAVIDAPWGVRAGPVLFRAPVQGSAKIAVARMLERGEGMTDQRH
CYAGVDWASESHHVFLTDGDGRKIGERVFRHGGEGLAEMAAWLMATSGAVEGDEIQVAIEVPHGPVVETLIERGFKVNAI
NPKQMDRFRDRFTMAGAKDDSRDAEVMASALRTDPRCFRLLAVSDPVVIELREWSRIAEDLSAERNRLTNRMREQLWRYF
PALLELENDLGAEWLLDLWDTVPTPDKAARIREATIAKLLKRHRIRRFDAPPCARYIAPAAAQGRRRNDRIRQRPRHYAH
CPHPPRQPAAQTGASSAGWPDRQPHRNRAGGAGAEEAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 9 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4UE_RHISN (Q53198)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444090.1
- GeneID:   962159
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01350
- InterPro:   IPR002525

Pfam domain/function: PF01548 Transposase_9

EC number: NA

Molecular weight: Translated: 39805; Mature: 39674

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDGPNWRSLPEPSRFVGSDPSPPVPRAPGGDTCPVGLAVIDAPWGVRAGPVLFRAPVQG
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
SAKIAVARMLERGEGMTDQRHCYAGVDWASESHHVFLTDGDGRKIGERVFRHGGEGLAEM
CHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHH
AAWLMATSGAVEGDEIQVAIEVPHGPVVETLIERGFKVNAINPKQMDRFRDRFTMAGAKD
HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCC
DSRDAEVMASALRTDPRCFRLLAVSDPVVIELREWSRIAEDLSAERNRLTNRMREQLWRY
CCHHHHHHHHHHHCCHHHEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPALLELENDLGAEWLLDLWDTVPTPDKAARIREATIAKLLKRHRIRRFDAPPCARYIAP
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AAAQGRRRNDRIRQRPRHYAHCPHPPRQPAAQTGASSAGWPDRQPHRNRAGGAGAEEAA
HHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GDGPNWRSLPEPSRFVGSDPSPPVPRAPGGDTCPVGLAVIDAPWGVRAGPVLFRAPVQG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
SAKIAVARMLERGEGMTDQRHCYAGVDWASESHHVFLTDGDGRKIGERVFRHGGEGLAEM
CHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHH
AAWLMATSGAVEGDEIQVAIEVPHGPVVETLIERGFKVNAINPKQMDRFRDRFTMAGAKD
HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCC
DSRDAEVMASALRTDPRCFRLLAVSDPVVIELREWSRIAEDLSAERNRLTNRMREQLWRY
CCHHHHHHHHHHHCCHHHEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPALLELENDLGAEWLLDLWDTVPTPDKAARIREATIAKLLKRHRIRRFDAPPCARYIAP
HHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
AAAQGRRRNDRIRQRPRHYAHCPHPPRQPAAQTGASSAGWPDRQPHRNRAGGAGAEEAA
HHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424