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Identifier: 16519934

GI number: 16519934

Start: 214848

End: 215255

Strand: Direct

Name: Not Available

Synonym: NGR_a01710

Alternate gene names: NA

Gene position: 214848-215255 (Clockwise)

Preceding gene: 16519935

Following gene: 16519932

Centisome position: 40.07

GC content: 62.01

Gene sequence:

>408_bases
ATGTGGGCCTACATCTTCGGGGCCGTCTGCCCGCGGAAGGGAAAGGGCGCGGGCCTGGTCCTGCCCTATTGCGATACCGA
GGCCATGCAGGAGCACCTCGCCGAGATCGGCCGGAGCGTCGATGACGGCGCCCATGCGGTGCTCATCCTCGATCAGGCCG
GATGGCACGTGACGCCGAAACTGAAGGTGCCGGACAACATCACCTTGATGTTCCTGCCGCCGCGCTCACCGGAACTCAAC
CCAGTCGAAAACGTCTGGCAGTTCATGCGCGACAACTGGCTCTCCAACCGTATCTTCAAGGACTACGACGACATCGTCAC
CCATTGCTGCGCCGCATGGAACAAGCTCGTCGACCAGCCGTGGAAGATCATGTCCATCGGACTCCGCGAATGGGCGCATC
GGTCATGA

Upstream 100 bases:

>100_bases
GTGGTCATGTGCGACCACACCAAAAGGCCGCACATATGGAAGCAAGCGATCCGGTCAAAAATATCTGCAGAAAACACTTG
CAAGCGGGAGCCGTCCACAT

Downstream 100 bases:

>100_bases
TCACCGCTCGTTGGTATAAGTCCTGTTCAAAAAAGCGGGCTTCGTGCCCGAACCATTTATTGGGAACGGCATGTGCGGAT
CTCATGGCCTGGCTGCAACC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MWAYIFGAVCPRKGKGAGLVLPYCDTEAMQEHLAEIGRSVDDGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELN
PVENVWQFMRDNWLSNRIFKDYDDIVTHCCAAWNKLVDQPWKIMSIGLREWAHRS

Sequences:

>Translated_135_residues
MWAYIFGAVCPRKGKGAGLVLPYCDTEAMQEHLAEIGRSVDDGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELN
PVENVWQFMRDNWLSNRIFKDYDDIVTHCCAAWNKLVDQPWKIMSIGLREWAHRS
>Mature_135_residues
MWAYIFGAVCPRKGKGAGLVLPYCDTEAMQEHLAEIGRSVDDGAHAVLILDQAGWHVTPKLKVPDNITLMFLPPRSPELN
PVENVWQFMRDNWLSNRIFKDYDDIVTHCCAAWNKLVDQPWKIMSIGLREWAHRS

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4PE_RHISN (P55614)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_444018.1
- RefSeq:   NP_444054.1
- ProteinModelPortal:   P55614
- GeneID:   962217
- GeneID:   962397
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01710
- KEGG:   rhi:NGR_a02070
- HOGENOM:   HBG680122
- ProtClustDB:   CLSK563541

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15474; Mature: 15474

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAYIFGAVCPRKGKGAGLVLPYCDTEAMQEHLAEIGRSVDDGAHAVLILDQAGWHVTPK
CCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCC
LKVPDNITLMFLPPRSPELNPVENVWQFMRDNWLSNRIFKDYDDIVTHCCAAWNKLVDQP
EECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WKIMSIGLREWAHRS
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MWAYIFGAVCPRKGKGAGLVLPYCDTEAMQEHLAEIGRSVDDGAHAVLILDQAGWHVTPK
CCEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCC
LKVPDNITLMFLPPRSPELNPVENVWQFMRDNWLSNRIFKDYDDIVTHCCAAWNKLVDQP
EECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
WKIMSIGLREWAHRS
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424