Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519909

GI number: 16519909

Start: 253550

End: 254044

Strand: Direct

Name: Not Available

Synonym: NGR_a01960

Alternate gene names: NA

Gene position: 253550-254044 (Clockwise)

Preceding gene: 16519910

Following gene: 16519907

Centisome position: 47.29

GC content: 58.59

Gene sequence:

>495_bases
ATGCCGAAGCTGATTTGGATACCGGAGTCCGTCGTCGAAGCGATGCTGAAAGACGCGAGCCGTTGGCACGACCTCGAAAC
AGGCGGGACCTTTATGGGATACTGGTCGGACGCGAATGTCGCGGTAATCACGAAGATGATTGACGGCGGATCGGAAGCGA
TCCGCACACGCAAAAGCTTTTCCCCGGACCGTGAATGGGAGCAATCCGAGATCGACCGTCATTATCGCGTGTCAGGCCGT
GTAGACACCTACATTGGCGACTGGCACACGCATCCGAACGCTCAGAGCGGCGAACCAAGCTGGACCGACCGTCGCTGCCT
CAGAACGATCATCCGCTCTCCAGAAGCGCGAGCGCCCAGACCAGTCATGATCCTCCTATGTGGCGGACCCGAGAACTGGC
TGCCTCATGCCTGGATCGGACAATTAACACGTCGGGCGCTTCTCTTCGAAAGGGTGGAAACCACCGCGGCCACGATCTCC
ACCTACAAGACCTAG

Upstream 100 bases:

>100_bases
GGACGGTATCCGAGGTCCGCACAGTCAATCTGCATAACGTAAAACGTCGTATGCCGCCGAGTTGGCGGATCGATCCACTG
GAACGACACCCGGACTGCGG

Downstream 100 bases:

>100_bases
CTGAACTCTACCGTGTCGGCGAGTGTTATCAGCCGCCCATCGTGCAAGTAGGGTGGAGCGTCCTTGATGCCACGCAGCGT
CGCGGTGTGAAGGTTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPKLIWIPESVVEAMLKDASRWHDLETGGTFMGYWSDANVAVITKMIDGGSEAIRTRKSFSPDREWEQSEIDRHYRVSGR
VDTYIGDWHTHPNAQSGEPSWTDRRCLRTIIRSPEARAPRPVMILLCGGPENWLPHAWIGQLTRRALLFERVETTAATIS
TYKT

Sequences:

>Translated_164_residues
MPKLIWIPESVVEAMLKDASRWHDLETGGTFMGYWSDANVAVITKMIDGGSEAIRTRKSFSPDREWEQSEIDRHYRVSGR
VDTYIGDWHTHPNAQSGEPSWTDRRCLRTIIRSPEARAPRPVMILLCGGPENWLPHAWIGQLTRRALLFERVETTAATIS
TYKT
>Mature_163_residues
PKLIWIPESVVEAMLKDASRWHDLETGGTFMGYWSDANVAVITKMIDGGSEAIRTRKSFSPDREWEQSEIDRHYRVSGRV
DTYIGDWHTHPNAQSGEPSWTDRRCLRTIIRSPEARAPRPVMILLCGGPENWLPHAWIGQLTRRALLFERVETTAATIST
YKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4QB_RHISN (P55623)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444029.1
- GeneID:   962404
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01960
- ProtClustDB:   CLSK563543
- InterPro:   IPR011952
- InterPro:   IPR000555
- PIRSF:   PIRSF028170
- TIGRFAMs:   TIGR02256

Pfam domain/function: PF01398 Mov34

EC number: NA

Molecular weight: Translated: 18796; Mature: 18665

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLIWIPESVVEAMLKDASRWHDLETGGTFMGYWSDANVAVITKMIDGGSEAIRTRKSF
CCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCC
SPDREWEQSEIDRHYRVSGRVDTYIGDWHTHPNAQSGEPSWTDRRCLRTIIRSPEARAPR
CCCCCCCHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PVMILLCGGPENWLPHAWIGQLTRRALLFERVETTAATISTYKT
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKLIWIPESVVEAMLKDASRWHDLETGGTFMGYWSDANVAVITKMIDGGSEAIRTRKSF
CCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHCC
SPDREWEQSEIDRHYRVSGRVDTYIGDWHTHPNAQSGEPSWTDRRCLRTIIRSPEARAPR
CCCCCCCHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PVMILLCGGPENWLPHAWIGQLTRRALLFERVETTAATISTYKT
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424