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Identifier: 16519903

GI number: 16519903

Start: 266319

End: 266768

Strand: Direct

Name: Not Available

Synonym: NGR_a02020

Alternate gene names: NA

Gene position: 266319-266768 (Clockwise)

Preceding gene: 16519904

Following gene: 16519902

Centisome position: 49.67

GC content: 63.56

Gene sequence:

>450_bases
ATGCCCAACGAGACCAAACGTGAGCGACTGCGCGAGCTCGGAGCACTCAATGCGCGGCCCGAAGCCGTCCGTGCACCCTG
GTTTCGTGAGTCCACCTTCTTCGATCCTCTCGATCTCGTGCAGGTGAAGTACGAGATGCTGCGTCACGTCCAGGAGGATG
GCGTCAACAAGGCCGATGCCGCCGCGCTTTTCGGTCTGTCGCGGCCAACCTACTATCAGGCCGAGGCCGCGTTCGAACGC
GACGGCATTGCCGGCCTGCTGCCGCGCACCCGAGGGCCAAAGTCGGCCCACAAACTCACCGACGAGGTCATGCAGCTCAT
CGAGCAGAACCAGCATGCGGGCGCCCCGCTGCAGGCGCGCTCCCTGGCAGAACTGCTGCATTCGACGCTCGGCATCAGTG
TCCATCCCCGCAGCATCGAACGCGCGATCGCCCGTAAAAAAAAACGGTGA

Upstream 100 bases:

>100_bases
TTATATGCAGCATAAACAGCCATATCGCCCGGCGTCGTTAGGTTGACACGTTCTCTATCGAGGCGTAATTTGATTTACAC
CACTAGGAAGAGGTTATGCC

Downstream 100 bases:

>100_bases
GCCCCATGCACGCACCCCGGTGCTACCGCGCAGCTGCAAGGATTTCTACGAGACGCTGCGCACCGCCGTCCTTTGCGGTC
AGGCCTGCGCCAAGGACATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFER
DGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR

Sequences:

>Translated_149_residues
MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFER
DGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR
>Mature_148_residues
PNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFERD
GIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Rhizobium NGR234A y4oM

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4BC_RHISN (P55370)

Other databases:

- EMBL:   U00090
- EMBL:   U00090
- RefSeq:   NP_443781.1
- RefSeq:   NP_444023.1
- RefSeq:   YP_002822312.1
- RefSeq:   YP_002822374.1
- RefSeq:   YP_002823202.1
- RefSeq:   YP_002823712.1
- RefSeq:   YP_002823882.1
- RefSeq:   YP_002826118.1
- ProteinModelPortal:   P55370
- GeneID:   7788056
- GeneID:   7788735
- GeneID:   7789001
- GeneID:   7789628
- GeneID:   7789693
- GeneID:   7793471
- GeneID:   962259
- GeneID:   962581
- GenomeReviews:   U00090_GR
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00260
- KEGG:   rhi:NGR_a02020
- HOGENOM:   HBG295175
- ProtClustDB:   CLSK864426
- InterPro:   IPR009057

Pfam domain/function: SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 16836; Mature: 16705

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADA
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQAR
HHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLAELLHSTLGISVHPRSIERAIARKKKR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADA
CCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
AALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQAR
HHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
SLAELLHSTLGISVHPRSIERAIARKKKR
HHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424